Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aaci_1290 |
Symbol | |
ID | 8424794 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
Kingdom | Bacteria |
Replicon accession | NC_013205 |
Strand | + |
Start bp | 1343597 |
End bp | 1344346 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 645027404 |
Product | sporulation sigma factor SigE |
Protein accession | YP_003184707 |
Protein GI | 258511273 |
COG category | [K] Transcription |
COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
TIGRFAM ID | [TIGR02835] RNA polymerase sigma-E factor [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTACGCGT TCCAGTTTCT CGAGACCAAG CGCCGCCTCG CGCTCCTTCG GCTTCGCCTC CTGTACATCC GCCTGCGAAT TCGCCTCCTG GGTCAGCCGG ATGAGGTTTA TTACGTCGGT GGAAGCGAGG CGCTCCCGCC GCCGCTCACG AAGGAGGAGG AGCAATATCT CCTTGAACGG CTTCCTTCGG GCGATCCGTC CGTGCGGTCG ATGCTCATTG AGCGAAACCT GCGCCTCGTC GTGTACATCG CCCGCAAGTT CGAGAACACG GGCGTGAACA TCGAGGACCT GGTGTCCATC GGCACCATCG GGCTCATCAA GGCCGTGAAC ACGTTCGATC CGTCCAAGAA GATCAAGCTC GCGACGTACG CGTCCCGGTG CATCGAGAAT GAGATACTCA TGTACCTCCG CCGCAACAAC AAACTTCGCG CCGAGGTGTC GCTGGACGAG CCGCTGAACG TGGACTGGGA TGGAAACGAG TTGCTCCTGT CGGACGTGCT CGGCACGGAT TCTGACACCA TCTACCGGAA CCTCGAAGAT GAGGTGGATC GCGAACTGCT CTACGACGCC CTCGACAAGT TGAGCGAACG GGAGCGCACC ATCATGGAGC TGCGATTCGG CCTGGGGACC GGTCAGGAGA TGACGCAAAA GGACGTCGCC GATCTTCTCG GGATTTCCCA ATCCTACATA TCGCGTTTGG AGAAGCGCAT TCTGAAGCGG CTTCAGCGGG AGTTTAACAA GATGATGTGA
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Protein sequence | MYAFQFLETK RRLALLRLRL LYIRLRIRLL GQPDEVYYVG GSEALPPPLT KEEEQYLLER LPSGDPSVRS MLIERNLRLV VYIARKFENT GVNIEDLVSI GTIGLIKAVN TFDPSKKIKL ATYASRCIEN EILMYLRRNN KLRAEVSLDE PLNVDWDGNE LLLSDVLGTD SDTIYRNLED EVDRELLYDA LDKLSERERT IMELRFGLGT GQEMTQKDVA DLLGISQSYI SRLEKRILKR LQREFNKMM
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