| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aaci_0904 |
|---|
| Symbol | |
|---|
| ID | 8424397 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013205 |
|---|
| Strand | + |
|---|
| Start bp | 978887 |
|---|
| End bp | 980566 |
|---|
| Gene Length | 1680 bp |
|---|
| Protein Length | 559 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 645027017 |
|---|
| Product | long-chain-fatty-acid--CoA ligase |
|---|
| Protein accession | YP_003184333 |
|---|
| Protein GI | 258510899 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCACGC GCCACTTTGC GTATTGGCCG AAACGTGTTC CAAGGACGCT GACGGTGCCC
CGCACGCCCA TTCACGACAA CCTCGCCGTG TCCGCGCGCC GATACCCGGA CAAGGCGGCC
ATCTACTACT ACGGGCGACA GATCTCGTTT CGGGAGCTTC ACGCTGAGGT CGAGGCGCTC
GCCGGTTATC TCCAACAGGC CCTCGGCGTG AAGCGGGGCG ATCGCGTCGC GCTCTACATG
CAGAATTCGC CACAGTTCGT CGTGGCCTAT TACGCCATTC TGCGCGCGGA CGCCGTCGTC
GTGCCCCTGA ACCCGATGCT CGTGGCGAAC GAGCTCCCCT TCTACTTCGA GGACTCCGGC
GCGCGCGTCG CCGTGGTCGG CCAGGAGCTG GTCGATCGCG TCCGGCCGCT CGTGGAAACC
GGCGCCATCG ACAAGGCCAT TGTCGCCTGT TACCGCGACG CCCTGCCGCC CGAGCCGGCG
CACCGCGTGC CAGACGTGGT CGCGGCGCCC GCCGTGCCCC TCGATCACCC TGCGCTGGTG
CCGTGGTCGC AAGCGCTTAC ATCCGGGCTT GCCCCGCGGC CGAGCGAGGT GTCCGCGGAC
GATCTCGCCG TCATCCCCTA CACGTCCGGC ACCACTGGCG TGCCGAAGGG CTGCATGCAC
ACGCATCGCA CTGTCCAGGC CAACATCGTC TGCGCCGCCG TCTGGAACGG CGTGACGCCG
GACGGCGTGG CGCTTTCAAC CCTGCCCTTC TTCCACGTCA CCGGCATGGA GCACAGCATG
AACGCGCCCA TCTACTGCGG CAACACGTTC GCGATTCTCA CGCGCTGGGA CCGCGAGACG
GCCGCGGAGC TCATCGAAAA GCTGCGCGTG ACTCACTGGA CCAACATCGC CACCATGGTC
GTGGACTTCC TCGCCAATCC GCGCATCGAG TCGTACGACC TGTCCTCCCT GATGGTGGTG
GGCGGCGGAG GCGCCGCGCT GCCGAAGGCG GTGGGCGAGC GGCTCAAGGC GCTCACCGGC
CTCGACTACG TCGAGGGCTA CGGACTGTCC GAGACCATCG CGCAGACCCA CACCAACCCG
CCGGATCGCG CCAAGCTCCA GTGCGCCGGC ATTCCGCTCT TCGACGTGGA TGCTCGCATT
GTGGATCCTG AGACGCTCGC GGAGCTCGGC CCGGGCGAGG AAGGCGAGAT TCTCGTCTGC
GGCCCGCAGG TCTTCCTCGG CTATTGGAAC CGGCCGGAGG AAAACGAGAA GGCGTTTGTC
GAGATCGACG GCAAGCGGTT TTTCCGCACG GGCGATCTCG GCCGCTACGA CGAAGAAGGG
TACTTCTTCA TCGTGGATCG CATTAAGCGG ATGATCAACG CGTCTGGATT TAAGGTGTGG
CCGACCGAGG TAGAGTCCAT CCTCTACAAG CATCCGGCGG TGGAGCAGGC GTGCGTCGTC
GGCGTCCCCG ATCCGCGCCG CGGCGAGACC GTCAAGGCGT TCATCATCCT CAAGCAAGAT
CAGAGGGGCG CAGTCACCGC GGAGGACATC ATCGCCTGGG CCCACGAGCA GATGGCGGCG
TACAAGTGCC CGCGGGAGAT CGAGTTTGTC GACAGCTTGC CGATGTCCGG CAGCGGCAAG
ATCCTCTGGC GCGTGCTGCA GGAGGAGGAG CGCAAGAAGC GGCAGGTCGC ATCGCCCTGA
|
|---|
| Protein sequence | MFTRHFAYWP KRVPRTLTVP RTPIHDNLAV SARRYPDKAA IYYYGRQISF RELHAEVEAL
AGYLQQALGV KRGDRVALYM QNSPQFVVAY YAILRADAVV VPLNPMLVAN ELPFYFEDSG
ARVAVVGQEL VDRVRPLVET GAIDKAIVAC YRDALPPEPA HRVPDVVAAP AVPLDHPALV
PWSQALTSGL APRPSEVSAD DLAVIPYTSG TTGVPKGCMH THRTVQANIV CAAVWNGVTP
DGVALSTLPF FHVTGMEHSM NAPIYCGNTF AILTRWDRET AAELIEKLRV THWTNIATMV
VDFLANPRIE SYDLSSLMVV GGGGAALPKA VGERLKALTG LDYVEGYGLS ETIAQTHTNP
PDRAKLQCAG IPLFDVDARI VDPETLAELG PGEEGEILVC GPQVFLGYWN RPEENEKAFV
EIDGKRFFRT GDLGRYDEEG YFFIVDRIKR MINASGFKVW PTEVESILYK HPAVEQACVV
GVPDPRRGET VKAFIILKQD QRGAVTAEDI IAWAHEQMAA YKCPREIEFV DSLPMSGSGK
ILWRVLQEEE RKKRQVASP
|
|---|
| |