| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aaci_0826 |
|---|
| Symbol | |
|---|
| ID | 8424319 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013205 |
|---|
| Strand | + |
|---|
| Start bp | 896226 |
|---|
| End bp | 897209 |
|---|
| Gene Length | 984 bp |
|---|
| Protein Length | 327 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 645026941 |
|---|
| Product | Transketolase central region |
|---|
| Protein accession | YP_003184257 |
|---|
| Protein GI | 258510823 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.207974 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAGGA TGTTGAACCT GGTCCAAGCC ATCAACGAAG CGCTCGATCT CAAGCTCGCG
GACGATCCGC GCGTCGTGCT CCTCGGCGAG GACATCGGGA AAAACGGCGG AGTGTTTCGC
GCGACCGATG GCCTTCTCGA GAAGTACGGC GAGGAGCGCG TGATCGACAC GCCGCTCGCG
GAGTCGGCGA TCATCGGCAC CTCCATCGGG ATGGCGGTCA ACGGCCTCAT CCCGGTGCCG
GAGATTCAGT TTTTGGCGTT CATCTTCCCT GCGCTGGATC AGCTGTTCTC GCACGTAGCT
CGCATGCGCT ACCGGTCGCA GGGGCAGTTT CCAGTGCCGA TGACCATCCG AACGCCGTAC
GGCGCGGGCA TTCACGGTCC GGAACTCCAC GCCGAGAGCG TGGAGAGTTT CTTCGCGCAC
ACCCCGGGGC TGAAGGTGGT CGTCCCGAGC GGTCCGTACG ACGCCAAAGG GCTGCTCATC
TCGGCCATTG AAGATCCCGA TCCGGTGGTG TTCTTGGAGC CCACCAAGCT GTACCGGGCG
TTCCGCGAAG AGGTGCCCGA AGGGCTGTAC CGGGTGCCCA TCGGCAAGGC CAAGCGGGTG
CGCGAAGGCG AGGACGTGTC GGTGTTCGCG TGGGGCTCGA TGCTGCACAC GGCGCTCAAG
GTGGCGGAGG CCATCGAGCG CGAGCGGGGC TGGACGTGCG ACGTGATCGA CCTCCGCACG
CTGTATCCGC TCGATCGCGA CGCCATCGTG GAATCGGTGC AGAAGACCGG GCGCGCGGTG
GTGGTGCACG AGGCGCACAA GACGGCGGGG CTTGGGGCCG AGATTGTGTC GCTGATCAAC
GAGGAGGCGC TTCTCTACCT TCGAGCGCCC ATCAAGCGGA TTGCTGGGTT CGATGTGCCG
GTGCCGTTCT TCGCACTGGA GGACGAGTAC ATGCCGACCG AAGCGCGCAT TCGCGCGGGG
ATTGAAGAGA CCATCACGTT CTGA
|
|---|
| Protein sequence | MSRMLNLVQA INEALDLKLA DDPRVVLLGE DIGKNGGVFR ATDGLLEKYG EERVIDTPLA
ESAIIGTSIG MAVNGLIPVP EIQFLAFIFP ALDQLFSHVA RMRYRSQGQF PVPMTIRTPY
GAGIHGPELH AESVESFFAH TPGLKVVVPS GPYDAKGLLI SAIEDPDPVV FLEPTKLYRA
FREEVPEGLY RVPIGKAKRV REGEDVSVFA WGSMLHTALK VAEAIERERG WTCDVIDLRT
LYPLDRDAIV ESVQKTGRAV VVHEAHKTAG LGAEIVSLIN EEALLYLRAP IKRIAGFDVP
VPFFALEDEY MPTEARIRAG IEETITF
|
|---|
| |