Gene Aaci_0620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_0620 
Symbol 
ID8424111 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp665815 
End bp666729 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content57% 
IMG OID645026739 
Producttranscriptional regulator, LysR family 
Protein accessionYP_003184057 
Protein GI258510623 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.37658 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACTTCA AGCAACTTCA CACCTTTGCT GTCGTGGCTC GTGAGCGAAG TTTCACACGC 
GCATCTGCGC TCCTAAACTA TGCGCAGTCT AGTGTTTCCG CCCAGATTCA AGCGCTGGAA
CAGGAACTGG GTACGCCGCT GTTTGACCGG ATCGGACGAA GCGTGCAACT GACGGAGGTC
GGGCAGAAAG TGCTCCCCCT GGTGCATGAT CTTCTGCAGA TGGAATCTGA ACTCCGATCC
ATTGCAAAAG GAGGATACGA GCCGAGTGGC ACGCTTGTGG TGGGTGCCCC AGAAAGCCTG
ATTGCATATC GGCTTCCGCC TGCACTGGCT GTATTTCACC AGCGATATCC TCGGGTTCAT
CTTCAATTTC GGGCGGATAG CTGCGCAGAG CATCGGGCGG CGCTGGCGCG CGGCGAGATC
GACGTGGCGC TGCTGTTAGA ACAGAGTGCT CCTCCAGCGG GTCTAGCCTT CCAAACTCTC
ACACCCGAGC GCATCGTGCT CGTCGCTCAT CCGAAAATTG CGGCGAGTAA TCCGAGTGCA
AGCACGCCGT CTCTGATCGA ATCCGCTGTT CTCCTGCTTG TGGAAGCTTC GAAAGGTGGC
GCGAGTTACC GAGAGGTGTT TGAGCGGCAA ATGATGCAGA TGGGTATCCG AATCCAGCGC
TCCATGGAAT TTGCGAGCGT GGAGGCCGTC AAGCAATGCG CGATCGCGGG CCTTGGCATT
GCACTTCTCC CTGAGATGGT GGTGCAACAA GAACTGGATG CCGGCAAGCT CACCCGCCTC
CCTTGGAACG ACTTGAAAAT CCCGACGTAT CTCGCATGGC GAGACGGGCG TTGGATGCCC
CAAGCAGCGC GGGAATGGAT CAAATGCGTC CGCACTTATG CGTATCGTGT TTGTCAATCG
CTCGAGGAGC GATAG
 
Protein sequence
MDFKQLHTFA VVARERSFTR ASALLNYAQS SVSAQIQALE QELGTPLFDR IGRSVQLTEV 
GQKVLPLVHD LLQMESELRS IAKGGYEPSG TLVVGAPESL IAYRLPPALA VFHQRYPRVH
LQFRADSCAE HRAALARGEI DVALLLEQSA PPAGLAFQTL TPERIVLVAH PKIAASNPSA
STPSLIESAV LLLVEASKGG ASYREVFERQ MMQMGIRIQR SMEFASVEAV KQCAIAGLGI
ALLPEMVVQQ ELDAGKLTRL PWNDLKIPTY LAWRDGRWMP QAAREWIKCV RTYAYRVCQS
LEER