Gene Aaci_0563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_0563 
Symbol 
ID8424054 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp616686 
End bp618074 
Gene Length1389 bp 
Protein Length462 aa 
Translation table11 
GC content57% 
IMG OID645026683 
ProductParB domain protein nuclease 
Protein accessionYP_003184001 
Protein GI258510567 
COG category[K] Transcription 
COG ID[COG1475] Predicted transcriptional regulators 
TIGRFAM ID[TIGR00180] ParB-like partition proteins 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCCTACA TTCCACGCTT GGATGAGGGG GCTGGAGATA TGAGCGAAAT GAGTATCCAT 
CGTCTCAAGC CGCATCCGAA AAACGTCGAA TACTACGCGG ATCTGGATGG GGAGAAGTAC
GAGGAGCTGA AGCGCAGCAT CGAAGTCCAC GGCATCCGGG ATCCGTTGAA GATTCTTCCG
GACGGCACGA TCTTGGCGGG ACACCAACGG TATCGGATCG CGAAGGAGCT CGGGATCGAG
CAGGTGCCGG TGGCGATTTA CGATGTGTCG CCGGAAGAGG CGGAATACTT GTTGATTGCT
GACAACGAGG AACGGCGGGG CGAGGACAAT GATCCGATGA GGAAGGCTAG AAGGGCGAAG
TTTTTGGCGG AGTACTGGGG GATTCGCCGA GGTGGGGTGA GAAAGAGTGT TTCGGGAAGC
GAAGGAGCAA AGGAGCAAAT TGCTCCTTTG AAAACTCTCG ATGACGTCGG GGCGGCCATT
GGTGAGGATC GATACACGAC CAAGCGGCTC ATGAAGCTGA ACGACTTGAT TCCTGAACTC
CAATCTTTGG TTTCGTCTGG CAAACTCGGC ACCAGCGCCG CTGAACAGTT GGCGTACCTA
AGCCCAGAGA TCCAGCGTAG CTTGTACGAG GCGCTGGGAG AGGAGATCGC GAACCGCACG
TTCGCGGAGA CCAAGGAGTT GCGTCGGCGG CTCGAAGAGG CCGAGCGTCG CGACCAGGAA
ACGGCGCGTT TGCAGGCGGA ACTCGCGGAG TTACGTGAGC AAGGGCGCGA AGAAGATCGC
CAGAAGATTG AGCAGTTGGA ACGTCGAATT CGGGATCTCC AGGCTCAGAG TTGGCGCGTG
GTCACGCTGG AGCAGGAGTT ATCCGCGTTG CGGGAACGCG GGCGGAAAGA GGACCGCGAG
CGCATTGCCG AGTTGGAGCA GGAAATTGAA CAGCTGAAGA ATCGGCCCGT AGAGCGCGTC
GAGGTGGTGC CCGATGCAGT GAAGCAAGAG ATTGAGGCGT GGAAACGTCG TGCGGCCGAG
CTCGAAAGCA AGCTAAAGTC CACGGAAGAA CTCGCCAATC AGCATGCGGA ACGTGTCGCG
AAGCTGTTCG ACGAGGTTGT GAGACTCAAA AGTGGCGGCG CGGTTGTAGA GATGCCCAAG
AGACGGGACG AGGAGTTCAA CGTCTCAGAA TGGGCCAAGC AGTATTTCCG ATTCATGGGT
GACACGTCGT TCCTGTTAAA AGCGAACACC GAGCGCATGG ATGCGCTTGT GGAGCATTTG
TTGCAGAAGC GGAACACTGA GATCTTGCTG CTGGATCTGC AAATGCTGGA GCGCGTTGCG
GCGTTTGCGG AGTACATGCA CAAGCGGTTA TCTGAACGGC TGCACAAGCC GCAATTGATC
AAGGGGTGA
 
Protein sequence
MSYIPRLDEG AGDMSEMSIH RLKPHPKNVE YYADLDGEKY EELKRSIEVH GIRDPLKILP 
DGTILAGHQR YRIAKELGIE QVPVAIYDVS PEEAEYLLIA DNEERRGEDN DPMRKARRAK
FLAEYWGIRR GGVRKSVSGS EGAKEQIAPL KTLDDVGAAI GEDRYTTKRL MKLNDLIPEL
QSLVSSGKLG TSAAEQLAYL SPEIQRSLYE ALGEEIANRT FAETKELRRR LEEAERRDQE
TARLQAELAE LREQGREEDR QKIEQLERRI RDLQAQSWRV VTLEQELSAL RERGRKEDRE
RIAELEQEIE QLKNRPVERV EVVPDAVKQE IEAWKRRAAE LESKLKSTEE LANQHAERVA
KLFDEVVRLK SGGAVVEMPK RRDEEFNVSE WAKQYFRFMG DTSFLLKANT ERMDALVEHL
LQKRNTEILL LDLQMLERVA AFAEYMHKRL SERLHKPQLI KG