Gene Aaci_0561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_0561 
Symbol 
ID8424052 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand+ 
Start bp615486 
End bp615935 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content54% 
IMG OID645026681 
ProductPilT protein domain protein 
Protein accessionYP_003183999 
Protein GI258510565 
COG category[R] General function prediction only 
COG ID[COG5611] Predicted nucleic-acid-binding protein, contains PIN domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.183955 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGTAAGT CGGTTCACCC GTCCGAGATG TGGGTTGACT CGAACGTGCT GTTGCGCCTG 
ATAACCGGGG ATCCGCCTAA GCAAGCCGAA GAAGTGGCGC AATTGGCTGA ATATCTTGAT 
CGTGGGCTCG TGTCTTTGCG CGTTCCGGCG ATTGTTTTTG CTGAGTTGTG CTGGGTGCTG 
GAAAGCTTCT ACGGGAAGCA TCCAACAGAA ATCGCGAAGG TGCTGGAGCA ATTAACGGAA 
GTCAAAGGTC TTGAGATCGA GGAAAAGGAG ATCGTACTCG AGGCGCTTCG CGACTTTGAC 
GAACAACACG TGGACTATAT CGACGCGTAC ATTGCCGCGA AAGCGCGACA CAGTAAGTGT 
CCGACGGTTT TGACCTGGAA CCAGAAACAC TTTCGACGGT TACAGGTTGG CCATGTGACG 
CCGGGCGATG TCTTGCGCTC GGGTGAATGA
 
Protein sequence
MSKSVHPSEM WVDSNVLLRL ITGDPPKQAE EVAQLAEYLD RGLVSLRVPA IVFAELCWVL 
ESFYGKHPTE IAKVLEQLTE VKGLEIEEKE IVLEALRDFD EQHVDYIDAY IAAKARHSKC 
PTVLTWNQKH FRRLQVGHVT PGDVLRSGE