| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aaci_0560 |
|---|
| Symbol | |
|---|
| ID | 8424051 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013205 |
|---|
| Strand | + |
|---|
| Start bp | 615221 |
|---|
| End bp | 615493 |
|---|
| Gene Length | 273 bp |
|---|
| Protein Length | 90 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 645026680 |
|---|
| Product | transcriptional regulator, AbrB family |
|---|
| Protein accession | YP_003183998 |
|---|
| Protein GI | 258510564 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2002] Regulators of stationary/sporulation gene expression |
|---|
| TIGRFAM ID | [TIGR01439] looped-hinge helix DNA binding domain, AbrB family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.052121 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGGCAT TCAGCACGTT GTCTCGCAAG GGGCAAACGG TGATTCCCGC CGAGATACGA
CGCTTGTTGG GCGCAGAGCC GGGTGACCAC ATTGTGTTCG AAGTGGTGGA CGGAGAAGTT
CGATTGCGTG TGGCCAAACG GAAGTCATTG CGTTCTTTGC TTGGGAGTTT ACCAGGCACT
GGTCCGGAGG ACATCAGTGT AATACGAAAG GCGGCTTATG CCTCCAAGGC TAGGGAGAAA
TACTTAAACG GAGACGCGAG CGCCGGTGAG TAA
|
|---|
| Protein sequence | MTAFSTLSRK GQTVIPAEIR RLLGAEPGDH IVFEVVDGEV RLRVAKRKSL RSLLGSLPGT
GPEDISVIRK AAYASKAREK YLNGDASAGE
|
|---|
| |