Gene Aaci_0307 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_0307 
Symbol 
ID8423794 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand+ 
Start bp353377 
End bp354345 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content59% 
IMG OID645026433 
ProductTfp pilus assembly protein ATPase PilM-like protein 
Protein accessionYP_003183755 
Protein GI258510321 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4972] Tfp pilus assembly protein, ATPase PilM 
TIGRFAM ID[TIGR01175] type IV pilus assembly protein PilM 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGCTTC GTCTCACCAC CTCATCGCGT TCCACCTCCG TTGGCGTGGA GATCTGCGAC 
GCAGGACTCC GCATCGCTGA GGTGGAACCC GGCAAACCTC TTCGCGTATC GCGGCTCGAA 
ACCGCGCCTT GGGATCTCTC CCAAACGGTG CGCGATCCGT ACCCCACGTT CGCGCTGGCG 
TCTATCTTGT CGCACGCATT TGACGCCAAT CGGCGTAGAA AGCTGACTGT CCACGTCGCG 
CTGCCTTCAA GGTTCACCGT GATCCGCCAG CTCACGCTTC CGGCGGTGGG TGAGAAAGAG 
CTCCAAAGTG CTATCGAGCT TCAGATTCAG CACAATATCC ATTTGCCATT TGACGAAGCT 
GCGTACGATT ATGTGCGCTG TGAACCTCCC GAGGACGAGG CGGACAGCGT CAGCGTGCTG 
CTCGTCGCAG CGGACAAATC ACGCGTGAAC GATGTCATCC AGGGGTTTCG GGCTGTCGGT 
ATCCGTCCGA AGACCATCGA CATCCACGCG CTAGCACTGT ATCGCTTGAT TCGGCGCTTC 
CGTCCAGATC TGCCGCAGAA TTTCCTCTTG TTGGAGACCA GCGAGGATAC CGTGGACATG 
CACGTCTTCC ACAATGGTTT GCTCTATCTC ACGCGCCAGG TTCCGGTCGC ACTCGCGCCT 
ACGGCGGACG TTCCCGCCTT CGACTATGTG AGTCAGTTCG ACGTCGAGAT CGAGCGCACG 
CTGAACTTCT TCATGTATAC GTTGAATCAG CGCGAGGCGG GGTTTGAGCG GCTTTTTGTC 
ACGCTGCCGC GCGACGTGGA TGCCTCCGAA CACCTTCAGG CTCTCGAGGA ACGCATCGGC 
ATGCCGTGCG AAGTCTTGCC GCTGGCAGAG ATGATTCGAC GCAACTGCGA AATCGGGCCG 
GAGGCGCATC GCATGCCCGA TCTTGCGGAT TATGCAGCGG CCATAGGTCT TGCGCTCCGG 
GGGGTGTGA
 
Protein sequence
MLLRLTTSSR STSVGVEICD AGLRIAEVEP GKPLRVSRLE TAPWDLSQTV RDPYPTFALA 
SILSHAFDAN RRRKLTVHVA LPSRFTVIRQ LTLPAVGEKE LQSAIELQIQ HNIHLPFDEA 
AYDYVRCEPP EDEADSVSVL LVAADKSRVN DVIQGFRAVG IRPKTIDIHA LALYRLIRRF 
RPDLPQNFLL LETSEDTVDM HVFHNGLLYL TRQVPVALAP TADVPAFDYV SQFDVEIERT 
LNFFMYTLNQ REAGFERLFV TLPRDVDASE HLQALEERIG MPCEVLPLAE MIRRNCEIGP 
EAHRMPDLAD YAAAIGLALR GV