Gene Aaci_0235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_0235 
Symbol 
ID8423704 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp257663 
End bp258937 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content56% 
IMG OID645026347 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003183687 
Protein GI258510253 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGCGTCG ATGAGATGGG GGATTCGGCA CACGCAAGGG TGTTGAAGCG ATGTGTGGGC 
CTTCTGGTGG TGCAGAAATT CTTCTCGAGC ACCCTTTTAT ATGGCGTCGT TGCCTCGCTC
TTCATGGTGT CGCGAGGGCT TGATTACACG GAAATCTTCA CATTGGAATC TATCTTGGCC
CTCGTTCTTT TTCTTGTGGA CATTCCTTCG AGTGCGTGGG CGGATAGATA TGATCGAAAA
TGGATGTTGG TACTCGGACA TGCAGCCGCG GTGATGTCCG TGCTGTTCTT TGCCTGGGCG
CGTCCATTCT GGATGTTTGC AGTCAGCTAT GCGCTGAGCG GTGTGGGTAT CGCCATCCTG
TCGGGCGTTG AATCGGCATA TGTCTACGAT CTGTGCAAGG CGTTCGATGG TCAAGAACAT
TCGACCCGCG TCTACGCTTG GCTCAATGCC GCTGAACAAT GCGCCACTCT GTTGAGCTTT
CCGTTGGGCA GTTGGCTGGC GATGCACAGC TACGTGCTGG CGGTCTACGC GACGGCGGCA
GCCAATGCGG TAGGACTCTT CCTTGTTCTG CTCCTGCCGG CCCAACGGGT TCGGGGGAAT
CAAGGACAAG AGGACGATCA ACGTGTGACG AACCAGCGGA GCGCATTGGT CTCCGCCTGG
AACTTCATTG TCTCGAACCC GCGATTGCTG CTGTTGGCCT TTGCTGGTCC CGCGGTGTGG
GTGGTGTTCA ACGGTTTCAA CTATTTGAAT CAGCCGCTCT TTGTCAGGGC AGGGTTGCCA
GTGCATGACT TCGGCTGGGT GATGGCGGCC GGATCGCTCT CTGCGATGGC GATTTCGCTC
TTGGTTGGCC GCGTAAACCA GCGATTTGGC TTCATGGGCC CCATTGTCGC CAGCACCCTG
GCGATGTCCG CTGCTTTTGC GTGCATGGCT TGGACGAATC ACCTGGCATG GATTGTCGTT
TCTATTTTGA TTCTGAATAT GGGCGAATCG CTACGGTCGC CCCTGTTAAA CAGCGTCACG
AATTCACTCG TGCCCTCGGA GGTTCGGGCG ACCGCTCTGT CCGTTCTGAC TGCAGTCGGC
ACCTTGTTGA CCTTGATTTT GAACCCCGTT ATTGGCCACT TTGCGGACCA CTCGGTGGCC
GCGGGCCTTC TTTTCAGTGG AGCGCTCGTT TTCCTGTTTT CCTTGGGAGG TTTTCCGTTC
CTGCTCTGCA TCAGCAGGCA TTCGGCGTTG CGTGAAATGT CTCCCGATCC GTCAGGGGAT
GCCAATCCGC GGTAA
 
Protein sequence
MCVDEMGDSA HARVLKRCVG LLVVQKFFSS TLLYGVVASL FMVSRGLDYT EIFTLESILA 
LVLFLVDIPS SAWADRYDRK WMLVLGHAAA VMSVLFFAWA RPFWMFAVSY ALSGVGIAIL
SGVESAYVYD LCKAFDGQEH STRVYAWLNA AEQCATLLSF PLGSWLAMHS YVLAVYATAA
ANAVGLFLVL LLPAQRVRGN QGQEDDQRVT NQRSALVSAW NFIVSNPRLL LLAFAGPAVW
VVFNGFNYLN QPLFVRAGLP VHDFGWVMAA GSLSAMAISL LVGRVNQRFG FMGPIVASTL
AMSAAFACMA WTNHLAWIVV SILILNMGES LRSPLLNSVT NSLVPSEVRA TALSVLTAVG
TLLTLILNPV IGHFADHSVA AGLLFSGALV FLFSLGGFPF LLCISRHSAL REMSPDPSGD
ANPR