Gene Aaci_0227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_0227 
Symbol 
ID8423696 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand+ 
Start bp247758 
End bp248591 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content65% 
IMG OID645026339 
Productputative transmembrane anti-sigma factor 
Protein accessionYP_003183679 
Protein GI258510245 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCTGACA AGGTGTGCGA ACTGTGTGCG CTCTACGTCC TCGGCGGGTT GGACGAAGCC 
GACCGCCGCG CGTTCGAGGA ACATCTGGCC ACTTGCCCTG ACTGCCAGGC CGAACTGGCC 
GAGATGAAGC CCATCGCCGA CGCCATGCTG TACGACTTCG ACGAGATGTC GCCGCCGCCC 
GAGTTGCGCC AGCGCGTCCT GACAGCCGTC TTTGCGGAGG CGGACGCGGA AAACGACGCG 
AAGGGCGCGT CCCCATCGCC GTGGGCCTCG AAGGATGGCG GAGCGCCGCG TGACCGCGTG 
ACGGACGACC GGGGTGCGTT TGAATCCTCA TCGGCGTTCG AACCCACACC TGACTCGAAA 
CCGACCACCG AAGCTTGGTC GGCGCGCCGA GAGCGGCGCC GAATTCGGAC GTGGTGGATG 
GCGCCGTGGG CCGCGCTGGT GCTCGTCGCG GCAGGGCTCG GCTGGTCGCT GCATCGCGTC 
GCTCCTTACC AAACGATTGG TGAAGTGAAG ACCCAGGTTC AGCTCGCGCC GACGGCAGGG 
ATGGGCAGCG CGCAGATGTG GGTCATTGCT TCACCTCAGG GTAAAGAGAT GCTCATCCGT 
TTTCACGGTT TGAAGCGACC GGTCGGATCG CAGGTCTACC AGGTCTGGGT GATTCACGAC 
GGCCAGCCGC CTCAATCCGC CGGCGTGTTT GTCCCGGACG CGCAGGGGAA CGCCGTGTTT 
GCCTCGCTGA TGCCGAATGA ACCTGTGAAT GTGGTCGCGG TCACGCTGGA GCCGAAAGCC 
ATCGACGTGC GACCGCTTGG CACCATGGTG TTCAAGGCGC AGCTTTCCAC GTGA
 
Protein sequence
MADKVCELCA LYVLGGLDEA DRRAFEEHLA TCPDCQAELA EMKPIADAML YDFDEMSPPP 
ELRQRVLTAV FAEADAENDA KGASPSPWAS KDGGAPRDRV TDDRGAFESS SAFEPTPDSK 
PTTEAWSARR ERRRIRTWWM APWAALVLVA AGLGWSLHRV APYQTIGEVK TQVQLAPTAG 
MGSAQMWVIA SPQGKEMLIR FHGLKRPVGS QVYQVWVIHD GQPPQSAGVF VPDAQGNAVF 
ASLMPNEPVN VVAVTLEPKA IDVRPLGTMV FKAQLST