Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aaci_0176 |
Symbol | |
ID | 8423642 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
Kingdom | Bacteria |
Replicon accession | NC_013205 |
Strand | + |
Start bp | 194360 |
End bp | 194734 |
Gene Length | 375 bp |
Protein Length | 124 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 645026285 |
Product | endoribonuclease L-PSP |
Protein accession | YP_003183628 |
Protein GI | 258510194 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
TIGRFAM ID | [TIGR00004] endoribonuclease L-PSP, putative |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0812936 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGATCA TTCACACGGA TCAGGCGCCG AAGGCCATCG GCCCATATGC TCAGGCGGTT CAGGTGGACC GATTCGTCTA CACGTCCGGC CAGATCCCGC TCACGCCCCA GGGCGAGATG GTCCAGGGAG GCGTGAAAGA GCAGGTGGAG CAGGTGTTCC GCAACCTCGA CGCGGTGCTC ACGGCCGCAG GCGCGCGGCG CGATCAGGTC GTGAAGGCCA CCATCTTCAT GACGGATCTC GCCGAGTTCC AGGTGGTCAA CGAGGCGTGC GAGGCGTTCT TCGGCAGCCA TAAACCCGCT CGCTCCACCG TGCAGGTCGC GGCGCTTCCG CGCGGTGCCA AGGTCGAGAT CGAGCTCGTC GCCTACCTGG ATTGA
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Protein sequence | MQIIHTDQAP KAIGPYAQAV QVDRFVYTSG QIPLTPQGEM VQGGVKEQVE QVFRNLDAVL TAAGARRDQV VKATIFMTDL AEFQVVNEAC EAFFGSHKPA RSTVQVAALP RGAKVEIELV AYLD
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