Gene Aaci_0176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_0176 
Symbol 
ID8423642 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp194360 
End bp194734 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content65% 
IMG OID645026285 
Productendoribonuclease L-PSP 
Protein accessionYP_003183628 
Protein GI258510194 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0251] Putative translation initiation inhibitor, yjgF family 
TIGRFAM ID[TIGR00004] endoribonuclease L-PSP, putative 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0812936 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGATCA TTCACACGGA TCAGGCGCCG AAGGCCATCG GCCCATATGC TCAGGCGGTT 
CAGGTGGACC GATTCGTCTA CACGTCCGGC CAGATCCCGC TCACGCCCCA GGGCGAGATG
GTCCAGGGAG GCGTGAAAGA GCAGGTGGAG CAGGTGTTCC GCAACCTCGA CGCGGTGCTC
ACGGCCGCAG GCGCGCGGCG CGATCAGGTC GTGAAGGCCA CCATCTTCAT GACGGATCTC
GCCGAGTTCC AGGTGGTCAA CGAGGCGTGC GAGGCGTTCT TCGGCAGCCA TAAACCCGCT
CGCTCCACCG TGCAGGTCGC GGCGCTTCCG CGCGGTGCCA AGGTCGAGAT CGAGCTCGTC
GCCTACCTGG ATTGA
 
Protein sequence
MQIIHTDQAP KAIGPYAQAV QVDRFVYTSG QIPLTPQGEM VQGGVKEQVE QVFRNLDAVL 
TAAGARRDQV VKATIFMTDL AEFQVVNEAC EAFFGSHKPA RSTVQVAALP RGAKVEIELV
AYLD