Gene Aaci_0092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_0092 
Symbol 
ID8423556 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand+ 
Start bp113595 
End bp114218 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content64% 
IMG OID645026200 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003183545 
Protein GI258510111 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.00302716 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGAACG CGAGGAGCCG GCGACCTGGG CGCCCGCCGC AGGTGGAGAT GGAGGAGCCG 
ACGGCTGAAA AAATTCTCCG CGCGGCTGCT GAGTGCTTCA TGGATCAGGG ATTCGCGGCG 
GTTTCGATGG ACGACGTCGC GGAACGAGCT GGCGTCACGA AGGCTGTCGT GTATTACTAT 
TATGGTTCCA AGACGGAGCT GTTTCAGCGC GCGATGATGG AGGTCATGCG CGCTTCCCGC 
GAGCGCACGC AGGCCATTCT GCGCGAGAAC GGGCCGCTGC GCGAGCGGCT GCAGAAGCTC 
ACGCGGACCC GCCTTGCCAT TCCAGCGACG CTCGACATGA ACCACATCCT TCGGGGCAGT 
CAACGCGCGC TTCGCCCGGA CCAAGTGGAC GAGATGCACA GAGCGGAAGA GCAGCTGGTG 
GAAGTCATCG CCCAAGAATT GCACGCGGAG ATGGAACAGG GGCGCTTGCG GCCGGTGGAC 
GCCATGTTCG TGGCGCGCTC GTACCTCGCG CTTCTCGGCA TGGGGCAGGC GGAGATCCGG 
CGTCGCGGTG GAGGACAAGC CGCCATCGAC GAGATTGCGG AAGAAATCGT GGATCTGCTG 
TGGCGCGGGA TTGAGCCGCG GTGA
 
Protein sequence
MRNARSRRPG RPPQVEMEEP TAEKILRAAA ECFMDQGFAA VSMDDVAERA GVTKAVVYYY 
YGSKTELFQR AMMEVMRASR ERTQAILREN GPLRERLQKL TRTRLAIPAT LDMNHILRGS 
QRALRPDQVD EMHRAEEQLV EVIAQELHAE MEQGRLRPVD AMFVARSYLA LLGMGQAEIR 
RRGGGQAAID EIAEEIVDLL WRGIEPR