Gene Aaci_0081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_0081 
Symbol 
ID8423543 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand+ 
Start bp101198 
End bp101806 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content66% 
IMG OID645026187 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003183534 
Protein GI258510100 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGGGATC GCATTGAGGA GGCCGCCAAG CGGGCGTTCT CCGAGTTTGG CTACAAAGGC 
ACGACCATGG ACCAGATTGC CCGGCTCGCG GGCGTCAGCA AGGGGGCCAT TTATCTTCAC 
TTCCCGAGCA AGGAAGCGCT GTTTCAACAC ATGCTGCGCG GGGTCATCGC GCAGGTGCGA 
GACGCGTTCG AGTCGGCCCA GGTGGAGGGC GACGATTACT TTCGCAATCT CGAGCGCGGC 
CTGCGCGCGC TCATGCGGTT TCGCGCCGAT CACGCCATGC TCTCGAAGCT CGTCCAGGAG 
GTCCGGCAAT TTGGGACGGC GGAGGCGCGC GCGGGGCTCG GGGAGCTTGA GGCCGCCATC 
CTGGACTACC TGGCGCGCCA CCTGAAGCGC GGCGTGGAGC TCGGCGTGGT GCGCCCGTGC 
CGGGCCAATC TCGTCGCGTT TGTCCTCCTT CGCGCCTACA CCGCGGTTTT GCGCGACTTT 
CCGTCTGCGG AAGGTCCGTT GTCCGAAGAG GACCTGTACC AGCTTTTCAC CGGCGTGTTT 
GTCGACGGCT TGCGCCTGAG GCCCGGCGAG GGCGAGCCCA GGAACACGCA GAGTGAGCAG 
GAGAGGTGA
 
Protein sequence
MRDRIEEAAK RAFSEFGYKG TTMDQIARLA GVSKGAIYLH FPSKEALFQH MLRGVIAQVR 
DAFESAQVEG DDYFRNLERG LRALMRFRAD HAMLSKLVQE VRQFGTAEAR AGLGELEAAI 
LDYLARHLKR GVELGVVRPC RANLVAFVLL RAYTAVLRDF PSAEGPLSEE DLYQLFTGVF 
VDGLRLRPGE GEPRNTQSEQ ER