Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Elen_3048 |
Symbol | |
ID | 8417383 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Eggerthella lenta DSM 2243 |
Kingdom | Bacteria |
Replicon accession | NC_013204 |
Strand | - |
Start bp | 3544901 |
End bp | 3545611 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 645026028 |
Product | membrane protein-like protein |
Protein accession | YP_003183380 |
Protein GI | 257792774 |
COG category | [S] Function unknown |
COG ID | [COG2717] Predicted membrane protein |
TIGRFAM ID | [TIGR01167] LPXTG-motif cell wall anchor domain |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCTCA TCTTGGTTCT TGCGGGCGCT GTGGCATTCG CGTTCGCATG CAAGCGGCCC ATCAAGTCGT GTCCGTTGGC GTTCTACGCC CTGGCTGCCA CGCTTGACGT GCTGTTCGTG GTCGGCTCGT TCGCGGGACT ACCGCCGATG CTGTACGACG CGCTGTTCCT GCTGTTGCAC AAGTGCACGC TGGCTACCGC GCTGTTCGCC GTCGTGATGT ACATCGGGGT GTTCGCGCGC GACTCGCGCG TGGCGACGTA CCTGCGTCCC ATCCGCGCCG AGCTGTCCAT CATGGCGTGG CTGCTGTCGC TGGGCCACAT GGCCATCTAC CTCTCCTCGT ACGCGGCCAA CCTCTCGACG GGGCTGCCGC AAACCAATGT CGCCGTGGCG CTTGCGCTTG CGTTGGCGCT GTTCGCGCTG CTGGTCGTGC TGGGGGTGAC GTCGTTCAAC GTGGTGAAGA AGCGCATGAA GAAGGAGACG TGGAAGCGCG TGCAGCTGCT GGCGTATCCC TTCTGGGGCC TCGTGTACGT GCATCTGCTG CTCATGCTGG TGCCCTCCGC CCTGCGCGGC GGCGCTCCTG CGCAGATGGC CGTCGTCGTG TACTCGGTGG TGTTCGTGGG CTACGCCGTC CTTCGCATCC GCCGCGCCGC GATCGACCGC CGCAAGGAGG AGTCCGGGCG CGTAGGCGAT GCCGTGCAGA ATCCAGCGTG A
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Protein sequence | MTLILVLAGA VAFAFACKRP IKSCPLAFYA LAATLDVLFV VGSFAGLPPM LYDALFLLLH KCTLATALFA VVMYIGVFAR DSRVATYLRP IRAELSIMAW LLSLGHMAIY LSSYAANLST GLPQTNVAVA LALALALFAL LVVLGVTSFN VVKKRMKKET WKRVQLLAYP FWGLVYVHLL LMLVPSALRG GAPAQMAVVV YSVVFVGYAV LRIRRAAIDR RKEESGRVGD AVQNPA
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