Gene Elen_3048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_3048 
Symbol 
ID8417383 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp3544901 
End bp3545611 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content66% 
IMG OID645026028 
Productmembrane protein-like protein 
Protein accessionYP_003183380 
Protein GI257792774 
COG category[S] Function unknown 
COG ID[COG2717] Predicted membrane protein 
TIGRFAM ID[TIGR01167] LPXTG-motif cell wall anchor domain 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCTCA TCTTGGTTCT TGCGGGCGCT GTGGCATTCG CGTTCGCATG CAAGCGGCCC 
ATCAAGTCGT GTCCGTTGGC GTTCTACGCC CTGGCTGCCA CGCTTGACGT GCTGTTCGTG
GTCGGCTCGT TCGCGGGACT ACCGCCGATG CTGTACGACG CGCTGTTCCT GCTGTTGCAC
AAGTGCACGC TGGCTACCGC GCTGTTCGCC GTCGTGATGT ACATCGGGGT GTTCGCGCGC
GACTCGCGCG TGGCGACGTA CCTGCGTCCC ATCCGCGCCG AGCTGTCCAT CATGGCGTGG
CTGCTGTCGC TGGGCCACAT GGCCATCTAC CTCTCCTCGT ACGCGGCCAA CCTCTCGACG
GGGCTGCCGC AAACCAATGT CGCCGTGGCG CTTGCGCTTG CGTTGGCGCT GTTCGCGCTG
CTGGTCGTGC TGGGGGTGAC GTCGTTCAAC GTGGTGAAGA AGCGCATGAA GAAGGAGACG
TGGAAGCGCG TGCAGCTGCT GGCGTATCCC TTCTGGGGCC TCGTGTACGT GCATCTGCTG
CTCATGCTGG TGCCCTCCGC CCTGCGCGGC GGCGCTCCTG CGCAGATGGC CGTCGTCGTG
TACTCGGTGG TGTTCGTGGG CTACGCCGTC CTTCGCATCC GCCGCGCCGC GATCGACCGC
CGCAAGGAGG AGTCCGGGCG CGTAGGCGAT GCCGTGCAGA ATCCAGCGTG A
 
Protein sequence
MTLILVLAGA VAFAFACKRP IKSCPLAFYA LAATLDVLFV VGSFAGLPPM LYDALFLLLH 
KCTLATALFA VVMYIGVFAR DSRVATYLRP IRAELSIMAW LLSLGHMAIY LSSYAANLST
GLPQTNVAVA LALALALFAL LVVLGVTSFN VVKKRMKKET WKRVQLLAYP FWGLVYVHLL
LMLVPSALRG GAPAQMAVVV YSVVFVGYAV LRIRRAAIDR RKEESGRVGD AVQNPA