| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Elen_3012 |
|---|
| Symbol | |
|---|
| ID | 8417346 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Eggerthella lenta DSM 2243 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013204 |
|---|
| Strand | + |
|---|
| Start bp | 3497384 |
|---|
| End bp | 3498646 |
|---|
| Gene Length | 1263 bp |
|---|
| Protein Length | 420 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 645025991 |
|---|
| Product | UV-endonuclease UvdE |
|---|
| Protein accession | YP_003183344 |
|---|
| Protein GI | 257792738 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4294] UV damage repair endonuclease |
|---|
| TIGRFAM ID | [TIGR00629] UV damage endonuclease UvdE |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.295167 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCATCG GGTACGCATC GAAGACGCTG GCAGCGCCCG GCGCGCGCAT GCAATCGGTG
GTGCAGCGGC TGGCGACGCC CGACCGCCTG GCGCAGGCGA TCGACGGCAA CCTGCGCGCG
CTGGACGCCG CCCTCGACTA CCAGGCGAAA AACGGCATCC ACCTGTTCCG CATCAGCTCG
GACGTGATCC CCTTCGGGTC GAGCCCCGTG AACGCGCTCG ATTGGATGCG CGACTTCGAG
CCGCATCTGG CCGCGCTCGG GCGCAAGGCG CGGCGCCATG GCATCCGGCT GAGCATGCAC
CCCGGCCAGT ACACCGTGTT GAACTCGCCC GATGCCGACG TGGTGGAGCG GGCGAAGCTC
GACCTGGCAT ACCACGCGGC GTTCCTCGAC GCGCTCGGGA TGGATGCGAG CGGAAAGATC
GTGCTGCACG TGGGCGGCGC GTACGGCGAC AAGCCTCGCG CGCTCGAGCG GTTCGCCAAC
GCGTACGCGA CGCTGCCCCT CGCGGTGCGC CGACGGCTCG TCATCGAGAA CGACGACCGG
CTGTTCACCG CCCAGGACGT GTTGGCGCTC AGCCGTGCAA CCGGAGCGCC CATGGTGTTC
GACACGCTGC ATCACGAGCT GAACCGCGAG CCCGACGCGC CGGACTGGCG AGCGCTGTTG
GACGAGGCGG CCGCCACCTG GAAGCCCGAG GACGGCGCGC AGAAGATGCA CTACGCGCAG
CAAGCCCCTG GTCGCAGGCC GGGCAGCCAC ACCGACACCA TCGAGCTTGC GCCCTTTCTC
GCGTTCTACC GATCGCTCGC AGAGCATCGG ACCGACAGCT CCTTCGGCAT GCCCGACATC
ATGCTGGAAG TGAAGGACAA GAACCTCTCC GCCATCAAAT GCATCCTCTG CACCAGCGAG
CACGGCCGCT TCAGCCGGCT CGAACGCGAA TGGGCGCGCT ACAAGTACGC CGTGCTCGAA
CACGACCAGG CAGCCTACCT CGCCCTGCGG GCGCTGCTCA AGGACAAGCG CACGTGGCCG
ACCGTTCCGT TCTACGAGAT AGTCGAACGC GCGCTGGCCG CACCTGTGGA ACCGGGATCG
TTCCGCAACG CCGCGCAGCA CGTATGGGGC TACGTGGCGC CGCACGCCAC CGCGCGCGAG
CACGCGGCGT TCGAGCGCCT TCTGGAGCAC GACGATCGCC CCGCCGCGAA GCGCAAGCTG
CACGCCCTCG CCGAGAAGTA CGACCAGCCT TACCTGTTGG AGTCCTACTA CTTCGTGCTG
TAG
|
|---|
| Protein sequence | MSIGYASKTL AAPGARMQSV VQRLATPDRL AQAIDGNLRA LDAALDYQAK NGIHLFRISS
DVIPFGSSPV NALDWMRDFE PHLAALGRKA RRHGIRLSMH PGQYTVLNSP DADVVERAKL
DLAYHAAFLD ALGMDASGKI VLHVGGAYGD KPRALERFAN AYATLPLAVR RRLVIENDDR
LFTAQDVLAL SRATGAPMVF DTLHHELNRE PDAPDWRALL DEAAATWKPE DGAQKMHYAQ
QAPGRRPGSH TDTIELAPFL AFYRSLAEHR TDSSFGMPDI MLEVKDKNLS AIKCILCTSE
HGRFSRLERE WARYKYAVLE HDQAAYLALR ALLKDKRTWP TVPFYEIVER ALAAPVEPGS
FRNAAQHVWG YVAPHATARE HAAFERLLEH DDRPAAKRKL HALAEKYDQP YLLESYYFVL
|
|---|
| |