| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Elen_2988 |
|---|
| Symbol | |
|---|
| ID | 8417320 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Eggerthella lenta DSM 2243 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013204 |
|---|
| Strand | - |
|---|
| Start bp | 3468505 |
|---|
| End bp | 3469491 |
|---|
| Gene Length | 987 bp |
|---|
| Protein Length | 328 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 645025965 |
|---|
| Product | D-alanine--D-alanine ligase |
|---|
| Protein accession | YP_003183320 |
|---|
| Protein GI | 257792714 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
|---|
| TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGTAG CAGTGTTGAC GGGCGGCAGC TCGACCGAGC GCGAGTTATC CCTGGCCAGC
GCCAAGAACG TGTGCGCAGC TCTTGAAGAG GCGGGCCATA GGACGGTGCT GTTGGATGCT
TCGTCCGACC TCGTTTCCGC CCTGCGCGTC GAGCGTCCCG ACGTGTGCTT CAACGCCCTG
CACGGCAAGC TCGGCGAGGA CGGAACCGTC CAGAGCCTGC TCGAATTCGT GGGCGTGCCC
TTCGTCGGAT CGCCGTCCAG CGTGTGCCGG CGCGCTTGGG ACAAATCCTC CCTCGGCTCC
GAGATGGCGG CCTACCGCGC CATCACCGGC GATGAGCCGA CGGCTTCCTG GCCGCAGGGC
GTCTGCATCG CGCGCGAGGC GTTCGAGAGC ATGGGCGCTG CGACGGCGTT TGACCTGGTG
GAAGACCGCG TGATCGGCGG GTATCCCGTG GCGGTGAAGC CTGCGCACGG CGTTTCGGCT
TCGGGCGTGC GCCGCGTTGA TTCCGTCGAC CAGCTGGGCG AAGCCGTGTC CGATGCGCTG
TCGTTCGACG ACGCCGTCAT CATCGAGCAG TGGATCGACG GCGTTGAGGT AACCGTGCCG
GTGCTGGGCT CCGGCTGGGA TGCCTACGCG CTGCCGCCGG TGGAGATCGT GGCGAAGGAG
GGCTTCTGCG ATACGGTCGC CTGTCGCACG CCGGGCGCGG TCGAGCTGTT CGCACCTGTG
CGCCCCGCCT CGTTGTCGAA CGACGAGGCC GATGCCCAGG CCATCCGTGC CGAAATCGAG
CGCGCCGCCT TGGAAGTGTG CCGTGCCTAT CAGGTGCGCG ACCTCGCCCG CGTTGATCTT
GTCTGGGACG GAGCCCAGGC GCGCGTCCTG GAGGTGGACG TGTCGCCCTC CCTGGCCGAA
TCTTCGCCGT TCTCCCTCGC CTGCGAAGCC TCCGGTTTGT CGCTGTCCGG CGTCCTCAAC
GAACTGGTCA GCCAATATGC GCGGTAA
|
|---|
| Protein sequence | MKVAVLTGGS STERELSLAS AKNVCAALEE AGHRTVLLDA SSDLVSALRV ERPDVCFNAL
HGKLGEDGTV QSLLEFVGVP FVGSPSSVCR RAWDKSSLGS EMAAYRAITG DEPTASWPQG
VCIAREAFES MGAATAFDLV EDRVIGGYPV AVKPAHGVSA SGVRRVDSVD QLGEAVSDAL
SFDDAVIIEQ WIDGVEVTVP VLGSGWDAYA LPPVEIVAKE GFCDTVACRT PGAVELFAPV
RPASLSNDEA DAQAIRAEIE RAALEVCRAY QVRDLARVDL VWDGAQARVL EVDVSPSLAE
SSPFSLACEA SGLSLSGVLN ELVSQYAR
|
|---|
| |