| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Elen_2797 |
|---|
| Symbol | |
|---|
| ID | 8417123 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Eggerthella lenta DSM 2243 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013204 |
|---|
| Strand | - |
|---|
| Start bp | 3247785 |
|---|
| End bp | 3248705 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 645025772 |
|---|
| Product | transcriptional regulator, XRE family |
|---|
| Protein accession | YP_003183133 |
|---|
| Protein GI | 257792527 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2944] Predicted transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.0000983915 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGACGGTTG AGGTGGATAT CGAGCATTTG ATATGTCCGA AATGCGGAAA TTCCATCGGA
TGGGCTCCTC TCGTCGATGA AGGTTTCGAC AAACTGTATC GAGCGTATCG CGAAAAGATG
GGCATCATGC AGCCCGAGGA AATCGTGGCC TTGCGTAAGA AGTACGGGTT TTCGCAGCGG
GTGTTTGCCG CTGCTCTCGA TATCGGAATT GCGAGCTTGC AACGATACGA AAGCGGGAGC
CTCGCTTCCG ATTCCCATGC GCAGCTGCTA GCCAACGCGC GCGATCCGCG CTTCTTGCTG
AAGTGCCTGG AACGGGGAGC ACGTAAGCTT TCTGACGAAG AGCGCGCCAA AGCGTGCGAT
ACGGTGCGGA AGCGCGGTCT CTCCCGGGTC GACTACGCGG TGGTTCGGCT CAACGTGCTG
GACGAGATCG CGAAGGAAAA GACGCTGGAT ACGGGCATGC GCGCGTTCGA TTCGGATCGC
ATGCGCGAGA CCGTGGTCTA CCTTGCCCGG CATGTTCGCG ATCTGTATCG TACGAAGCTG
AACAAGGTGC TGTTCTACCT GGATTTCGCC GCCTACCGCG ACAGCGGGGA GGGGTTCACG
GGTCTGCGCT ATGCGAAGGC GCCGTTCGGT CCGGTTCCCG ACCGGTTCGA GCTGCTGGTT
GCCGGTCTCG TCGACGACGA GGCGCTCGCA TTGCGCGAAC AGGGCGACGG CCAGGTGATC
GTTGCGGGAC GCGCGGAGGA TCCCACCTGT TTTTCTGCAT CCGACCTGAG CCTGCTCGAC
GCGGTATGCT CGTTCGCCAA CGGCTTCGCT TCAACGTCGG CGTTATCCGA GTTCTCCCAT
GGCGAGCGAG GCTGGCGCGA GACGGAGGTG GGGGGCATCA TCTCGTACGG GTACGCCGCG
CACCTTCTCT GGGCTTCGTG A
|
|---|
| Protein sequence | MTVEVDIEHL ICPKCGNSIG WAPLVDEGFD KLYRAYREKM GIMQPEEIVA LRKKYGFSQR
VFAAALDIGI ASLQRYESGS LASDSHAQLL ANARDPRFLL KCLERGARKL SDEERAKACD
TVRKRGLSRV DYAVVRLNVL DEIAKEKTLD TGMRAFDSDR MRETVVYLAR HVRDLYRTKL
NKVLFYLDFA AYRDSGEGFT GLRYAKAPFG PVPDRFELLV AGLVDDEALA LREQGDGQVI
VAGRAEDPTC FSASDLSLLD AVCSFANGFA STSALSEFSH GERGWRETEV GGIISYGYAA
HLLWAS
|
|---|
| |