Gene Elen_2736 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_2736 
Symbol 
ID8417062 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp3171996 
End bp3173354 
Gene Length1359 bp 
Protein Length452 aa 
Translation table11 
GC content71% 
IMG OID645025712 
ProductMATE efflux family protein 
Protein accessionYP_003183073 
Protein GI257792467 
COG category[V] Defense mechanisms 
COG ID[COG0534] Na+-driven multidrug efflux pump 
TIGRFAM ID[TIGR00797] putative efflux protein, MATE family 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCAGATG CTTCTCTTTC CTTTACCGAA GGGCCGCTGT TCAGGCGGTT GCTGGCGTTC 
GCGTTGCCGC TCATGGCGGT GAACCTGCTG CAGTACGTGT ACCAGGCTGT GGACATGGTG
GTGGTCGGCC AGGTGGTGGG GCCGGTGGGG CTCGTGTCCA TCAGCAACGC GACGAACGCC
GCCTATATCG TGAACGCGTT CGTCATCGGC CTCACGGCGG GCGGCGGCGT GGTCGTCGCG
CGGTTCGTGG GCGCGCGCGA CGTGGCCGGC CAGCGGCGCG CGTACGCGGC CACGTTGGCG
GTGGCCCTGG CGGGGTCGGC GGCCATCGCC GTGCTGGGCG TGGCGTTGGC GCGCCCAGCC
TTCACGGCGA ACGCCGTGCC TGCGGCATCG CTCGAAGGCG CCGTCGGCTA CACCGTGGTG
CTGTGCTGCG GCTGCGCGGG GCCGTTCCTC ATGAACGCCG CAGCGGCCTT CCTCAAGGCG
CAGGGCGACG CGCGCACGCC GCTTCAGCTG GTGGGCGTAT CGGCGCTGGT GAACGTGGCG
CTCGACCTGG TGCTGGTGGG ACCGGCGGGC CTCGGCGTGG TGGGCGCCGC CTGGGCGACG
GTGGTCGCGC AGAGCGTGGC GGCCGTCGGC GCGCTCGTCG TGGTGCGGCG GCGTTTCCCC
GGCGGGCGCC TGGCCGGCGC GTTTTCGCGT AGCGGCGACG TGCCGGTTGG AGCGAGCGTG
ATCGAGGTGC TGCGCGTGGG CGTTCCCTCT GCCGTGCAGA TGGCGGTGGT GAACCTGTCG
TACGCGCTGG TCACCGGGTT GCTGAACCGC TACGGCACCG ACGTGGCCGC CGCTGCCGGC
GTCGGCCTGC AGATCAGCAC CATCGCGGGA CTGCCGTGCT GGGCCATCGG CCAGGCCATC
ACCACGGCGG CGGCGCAGAA CGCAGGCGCG GGCGAGCTGC GCCGGGCCCG CGACGTGGCG
CGCATCGGCG CCACGTTCAA CGTGAGCGTG ATCGTGGGCG TGCAGATCGC GGTGCAGTTG
CTGGCGCCGG CGCTGGTGGT CGCGTACGGC CTGACCGAGC CGTTAACGAT GGATACGGCC
GTGCTGTACC TTCGCATCAC GTGCAGCGTG AACGGGCTGT TCTACGCGGC CATGTACAGC
TTCGACTCGT TCGCATTGGG GGCGGGCACG CCGCGGCTCG TGTTGGCGAA CTCGCTGATC
GACGCGTTCG TCGTGCGCTT CGGCCTGGCG TTTCTGCTGA GCGGCGTGCT GGGCTTCGGC
TACGTGGGCA TCTTCGTCGC CCAGGCGGCG TCGCCCGTGA TGCCGGCGCT CATCGGCGCC
CTCTACCTGC GCCACTGGAC GCGCACACGG GACGTGTAG
 
Protein sequence
MSDASLSFTE GPLFRRLLAF ALPLMAVNLL QYVYQAVDMV VVGQVVGPVG LVSISNATNA 
AYIVNAFVIG LTAGGGVVVA RFVGARDVAG QRRAYAATLA VALAGSAAIA VLGVALARPA
FTANAVPAAS LEGAVGYTVV LCCGCAGPFL MNAAAAFLKA QGDARTPLQL VGVSALVNVA
LDLVLVGPAG LGVVGAAWAT VVAQSVAAVG ALVVVRRRFP GGRLAGAFSR SGDVPVGASV
IEVLRVGVPS AVQMAVVNLS YALVTGLLNR YGTDVAAAAG VGLQISTIAG LPCWAIGQAI
TTAAAQNAGA GELRRARDVA RIGATFNVSV IVGVQIAVQL LAPALVVAYG LTEPLTMDTA
VLYLRITCSV NGLFYAAMYS FDSFALGAGT PRLVLANSLI DAFVVRFGLA FLLSGVLGFG
YVGIFVAQAA SPVMPALIGA LYLRHWTRTR DV