| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Elen_2556 |
|---|
| Symbol | |
|---|
| ID | 8416880 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Eggerthella lenta DSM 2243 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013204 |
|---|
| Strand | - |
|---|
| Start bp | 2989936 |
|---|
| End bp | 2991225 |
|---|
| Gene Length | 1290 bp |
|---|
| Protein Length | 429 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 645025537 |
|---|
| Product | protein of unknown function UPF0118 |
|---|
| Protein accession | YP_003182900 |
|---|
| Protein GI | 257792294 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0628] Predicted permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 49 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGAGACTC CCAGCTCCGA AGCGACGAAA ACCGACAAAG CGAAGCGAAG CTTTCTCATA
GTCTGGACGA TCGTGGGCGG CATTCTGCTC ACGGGCGTTC TCGTTTACCT GTTCAATATC
TTGAGCGTGC CTATCGGCAT CGTCATCTGG TCCATCGTCA TCGTATTCTG CCTGCGAGGA
CCGGTGAACA AGCTGGAGAA ACTGGGCGTT CCCCGCGTGG CCGGCACGAC GATCGCCTAC
GTCCTGATGT TCGTTGTTCT GGCTTTGGTG GGGCTTCTCA TGTTCTCGCC GGCGTTCGGC
GTGGGCGACC AGTTCACCAA CCTCATCGAG AGCATTCCGG GCTACGTTCA GACCATCGCC
GGGTGGGGCA ACGACCTGTA CACGCGCTAC GCCGACGTGC TTCAGAACGA CACGGTGCAA
ACGTGGATCA ACAATGCGCT GGACGCCATC GTCTCATGGG CTTCGACGTT CGCCCGCGAT
AGCGCCAACG GCGTGGTCGC CATCGGGACG GGTCTGGTCA ACACGTTCGT TGCGCTCGGG
TTTGCGCTGG TGGTGGCTTT CTGGATCCTC ATGGAGCTTC CGCAGCTTGG ACGCGAATGC
ATGCGCCTCG TCAACCCGAA GCGCCACGAG GATCTGGAAA TGCTGCACGT CACGTTCACG
CGCGTCATGG GCGGCTACAT CAAGGGCACG CTTTTGCAGT GCGCCATCAT CGGCGTGGGC
TGCGTCGTTC TGTTCGGCGC CATCGGCATC CCGAACTACG CGGCGCTCGG CGGTATCGCC
GGCCTGTTGA ACATCATCCC CATCGTGGGC CCGTGGCTCG GCGGTGCGCT TGCGGCCATC
GTGGGCGTGT TCGTCAGCCC CTGGATCGCG GTCATCGCGC TCGGCGGCAC CATTGCCATC
CAGCAGATCG TCTATACGTT TATTTCGCCG AAGATCATGG CGAACTCGGT GGACGTTCAT
CCGGCGCTCA CCCTCATCGC TTTGATGGCG GGCTCCGCTA TAGGCGGCGC TATGAGCGGC
TTCACGGGCT CGCTTGTGGG TATGTTGGCT TCCATTCCCG CCGTCGCGGT TGCGAAGTCG
GTTTTCGTGT ATTATTTCGA AAAGCGCATG GGGCGGCAGC TGGTAAGCGC AGACGGCGTG
TTCTTCCAAG GCACCACCGC CTCGGACGGC ACGCTCGATC CCATCGCCGA TGCCACGTCG
CCGCATCCCG ACATCTCGGC GGCGTTCGAG CGCGTCGAGC AGCGCAAGGC CGAGGCCGAT
CAGAAGGCGC AGCATCGTAA GAAGCGTTGA
|
|---|
| Protein sequence | METPSSEATK TDKAKRSFLI VWTIVGGILL TGVLVYLFNI LSVPIGIVIW SIVIVFCLRG
PVNKLEKLGV PRVAGTTIAY VLMFVVLALV GLLMFSPAFG VGDQFTNLIE SIPGYVQTIA
GWGNDLYTRY ADVLQNDTVQ TWINNALDAI VSWASTFARD SANGVVAIGT GLVNTFVALG
FALVVAFWIL MELPQLGREC MRLVNPKRHE DLEMLHVTFT RVMGGYIKGT LLQCAIIGVG
CVVLFGAIGI PNYAALGGIA GLLNIIPIVG PWLGGALAAI VGVFVSPWIA VIALGGTIAI
QQIVYTFISP KIMANSVDVH PALTLIALMA GSAIGGAMSG FTGSLVGMLA SIPAVAVAKS
VFVYYFEKRM GRQLVSADGV FFQGTTASDG TLDPIADATS PHPDISAAFE RVEQRKAEAD
QKAQHRKKR
|
|---|
| |