| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Elen_2084 |
|---|
| Symbol | |
|---|
| ID | 8416402 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Eggerthella lenta DSM 2243 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013204 |
|---|
| Strand | - |
|---|
| Start bp | 2451407 |
|---|
| End bp | 2452111 |
|---|
| Gene Length | 705 bp |
|---|
| Protein Length | 234 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 645025067 |
|---|
| Product | alanine racemase domain protein |
|---|
| Protein accession | YP_003182436 |
|---|
| Protein GI | 257791830 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0325] Predicted enzyme with a TIM-barrel fold |
|---|
| TIGRFAM ID | [TIGR00044] pyridoxal phosphate enzyme, YggS family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.000045543 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 0.0000000000000968323 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGGATTCA AAGAGCGCTA CGAGCGCACG GTCGCAGAGG CGGCCGCCTG TTGCGAGGCG
TGCGGGCGCG ATCCGAAGAG CGTGGTCGTA GTGGCGGTGT CGAAGACGGT GGGTGCCGAC
GAAGTGGCCG AGGCCATCGA GGCCGGCGCG CACGACTTCG GCGAGAACCG CCCGGACTCC
CTCGAGGGGA AGCGCGCTCG CTTTCCGCAG CAGACCTGGC ACTTCATCGG CAACATCCAA
TCGCGCCGCA TTCCCGACAT CGTGCGGGAT GCCGCGCTCG TGCACTCGCT GTACCAACAG
CGTCACGTGC CGAAGTTCGA CGCCGCAGCT GCGGCGTCGG GCAAGGTGCA AGACGTGCTG
CTCGAGGTGA ACGTGTCGGG GGAGGCGAGC AAGAGCGGTC TCGCGCCGAG CGAGGTGGCC
GGCATGCTGG AGTACTGCGC GGGCTTTCCG CACGTGCGCG TGCGCGGGCT TATGACGATG
GCGCCGCAGG GCGATGCGCA ACGGGCTCGC GCATGCTTCG CCGATCTGGC GCGTTTGCGC
GACGAAGTGC GGCTTGGGCT CGACGGGGAA CAGGCCGCCG TATTCGATGA GCTTTCTATG
GGCATGAGCG AAGACTGGCA TGAGGCGATA GCCGAGGGCG CTACCATAGT GCGCATCGGG
CGAGCCCTGT TCGACGACGC TTTCGAGAGC CCCGCGCACG CGTGA
|
|---|
| Protein sequence | MGFKERYERT VAEAAACCEA CGRDPKSVVV VAVSKTVGAD EVAEAIEAGA HDFGENRPDS
LEGKRARFPQ QTWHFIGNIQ SRRIPDIVRD AALVHSLYQQ RHVPKFDAAA AASGKVQDVL
LEVNVSGEAS KSGLAPSEVA GMLEYCAGFP HVRVRGLMTM APQGDAQRAR ACFADLARLR
DEVRLGLDGE QAAVFDELSM GMSEDWHEAI AEGATIVRIG RALFDDAFES PAHA
|
|---|
| |