| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Elen_1875 |
|---|
| Symbol | |
|---|
| ID | 8416179 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Eggerthella lenta DSM 2243 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013204 |
|---|
| Strand | - |
|---|
| Start bp | 2205238 |
|---|
| End bp | 2206233 |
|---|
| Gene Length | 996 bp |
|---|
| Protein Length | 331 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 645024845 |
|---|
| Product | ketol-acid reductoisomerase |
|---|
| Protein accession | YP_003182228 |
|---|
| Protein GI | 257791622 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0059] Ketol-acid reductoisomerase |
|---|
| TIGRFAM ID | [TIGR00465] ketol-acid reductoisomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.000873272 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGTTA CGATCTATCA TGAGAACGAC GCGAACCCCC AGCTCATCCA GGACAAGAAA
GTGGCCATCA TCGGGTACGG CAGCCAGGGC CACGCCCATG CGCTCAACCT GAAAGACTCG
GGGGTCGACG TGCGCGTGGG CCTGCGCGAG GACTCGAAGT CGCGGGTCAA GGCCGAGGAG
GCGGGCCTCA AGGTGATGAG CGTCGCCGAC GCCGCCGAGG AAGCCGACTT CATCATGATC
CTCACGCCCG ACGAGACGCA GGCCGCAACC TACGAGGCCG AGATCGCCCC GCATCTCAAG
CCCGGCGACA CCCTCGCGTT CGCGCACGGC TTCAACATCC ACTTCGGCTA CATCACGCCG
CCCGAGGACG TGGACGTCGT CATGATCGCG CCGAAGGGCC CGGGCCACAT GGTGCGCCGC
GTATTCACCG AGGGCGCGGG CGTGCCGTGT CTCATCTGCG TCCAGCAGGA CGCGTCGGGC
CGGGCTAAGG ACGTGGCGCT GTCCTACGCG TGGGGCATCG GCGGCGCGCG CGCCGGCGTC
ATCGAGACCA CGTTCAAGAA CGAGACGGAA ACCGACCTGT TCGGCGAGCA GGCCGTGCTG
TGCGGCGGCG TGACGGCCCT CATCAACGCC GGGTTCGAGA CGCTCGTCGA GGCGGGCTAC
CCGCCCGAGA TGGCCTACTT CGAGTGCTTC CACGAGATGA AGCTCATCGT GGACCTCATG
TACGAAGGCG GCATGTCGAA CATGCGCTAC TCCATCTCGA ACACGGCCGA GTACGGCGAC
TACTACGCCG GCCCCCAGGT GATCACCGAC GACGCGAAGG CCGCGATGAA GACCATCCTC
GAGCGCATCC AGGACGGCAG CTTCGCCCAC GAGTTCATGG AGGACTCCAA GAACGGCCAG
GCGTGGCTGA AGGAGCAGCG CATGGAGCAC GGCAACGCCC AGATCGAGGA AGTGGGCGCC
AGCATCCGCT CGATGTTCAG CTTCGTGAGG AGGTAG
|
|---|
| Protein sequence | MAVTIYHEND ANPQLIQDKK VAIIGYGSQG HAHALNLKDS GVDVRVGLRE DSKSRVKAEE
AGLKVMSVAD AAEEADFIMI LTPDETQAAT YEAEIAPHLK PGDTLAFAHG FNIHFGYITP
PEDVDVVMIA PKGPGHMVRR VFTEGAGVPC LICVQQDASG RAKDVALSYA WGIGGARAGV
IETTFKNETE TDLFGEQAVL CGGVTALINA GFETLVEAGY PPEMAYFECF HEMKLIVDLM
YEGGMSNMRY SISNTAEYGD YYAGPQVITD DAKAAMKTIL ERIQDGSFAH EFMEDSKNGQ
AWLKEQRMEH GNAQIEEVGA SIRSMFSFVR R
|
|---|
| |