Gene Elen_1716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_1716 
Symbol 
ID8416015 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp2021006 
End bp2022886 
Gene Length1881 bp 
Protein Length626 aa 
Translation table11 
GC content70% 
IMG OID645024682 
ProductDNA primase 
Protein accessionYP_003182070 
Protein GI257791464 
COG category[L] Replication, recombination and repair 
COG ID[COG0358] DNA primase (bacterial type) 
TIGRFAM ID[TIGR01391] DNA primase, catalytic core 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGGCG GCATCAGCGA AGAGGACATC CAGAAGGTGC GCGAGGCCAA CGACCTCGTC 
GAGGTTATCG GAGAGCGGAC GCCGGTGAAG CAGCGCGGGC GCGATTTCTG GTGCTGCTGC
CCGCTGCACA ACGAGAAGAC CCCGTCGTTC AAGATCGATC CGGCCTTGCA GCTATGGCAC
TGCTTCGGCT GCGGCGAGGG CGGCGACGTG TTCGGCTTCA TCATGAAGAC CGAGGACCTG
TCGTTTCCCG AAGCCGTGCG CCGGTTGGCC GAGCGCGCGC ACATCGACAT CGCCGAGAGC
GGCGGGCGCA AGAGCATCGG CAGCAGCCGC AAGGCCCGCC TCAAGGCCGT CTGCGACGAG
ACCTCGCAGT TCTACCATTG CCAGCTCATG CGCAACCCCG GCTCCGACGC GTCGGCGGCG
CGCAGCTACC TGGGCGCGCG CGGCCTGGGG GGCGAGGTGC CGAAGACCTG GCAGCTCGGT
TTTGCGCCGG GGCACGGGCA GCTGGTGCGC CACCTGTCTG CGAAGGGCTT CAAGCCCGAC
GAGATGGTGC AGGCGAACGT GGCGCTGTCG AACGACGGGG GCAAGCTGCG CGACCGCTTC
TACAACCGCA TCATGTTCCC CATCAACGAT CCGCAGGGCG AGTGCATCGC CTTCGGCGGA
CGCGTGGTGG GCAAGGGCGA GCCGAAGTAC CTGAACTCGC AGGAGACTCC GCTGTTCCAC
AAGTCGCAGG TGCTCTACGG TATGGACAAG GCGAAAGCGG CCATGGCCTC GACCGGCATA
TCCGTGGTGG TGGAGGGCTA CACCGACGTC ATCGCGCTGC ACGAGGCGGG CGTGAGGAAT
GCGGTGGCCA CGCTGGGCAC CGCGCTCACC ATGCGCCATA TCCGCTTGCT GTCGCGCCAC
GCGCAGCATC GCATCGTATA CCTATTCGAC GGCGACGAGG CAGGCCAGCG CGCCGCCGAC
CGGGCGCTCG CGTTCATCGA CGACTCCATG ACGCCCGAGG CGGGCAAGAG CCGCATCGAG
CTGGCTGCCG TCACGCTGCC GGACAACCTC GACCCGGCCG ACTTCGTGGC CCAGCGCGGT
GCCGAGGAGC TGCAGAAGCT CATCGCGAAC GCCCAGCCGC TGCTGAAGTA CGGCATCGAG
CGCCGCCTTG CGCGCCATGA CCTCAGCCGC GCCGAGGGCC GCGCCGCCGC CCTTGCCGAC
GCGCTGCAGG TGCTGGCCCC CATCAAGGAC TCCATGCTCG CGCGCGATTA CGCCGTGCAG
ATAGCCACGA GCGTGCGCGC CCGCGAGCAG GACGTGATCG ACCAGCTGGA GCATTTGAAG
GCTCCGAAGG CCGAAGGGGA GCGCGACGAC GAGTCCGCGC CGGAAGGTTT CGAGCGTGCC
GTCGCTCCGC GGAGGCCGGC TCGCAACCTG CCGCGCGCCG AGATCAACCG CCGTCGTTTC
GAACGTCAGC TGCTGACGCT GGCCGCGCGC CGCCCCGACC TGGCGCTCCT GCATGCCGAC
GCGCTCGCGC AGACGCAGTG GCACGAGCAG GCGCACGCCG CGATCGCCCA GAGCATGCTC
GACGTGCTGG CCGAGGATCC GGCGGCCTCC TCGGCGCGGC TCGTGACGGA GGCGTCCCGC
GCGCTTCCGG ACGCCGCTGC CGTGCTGACG TCGGGCACCG TGTCGGAGAC GGCTGCGCCC
GAGCAGCTGG CGGCCTTCCT CGTGGAGGAG CTCGCCATCG GCGATGCCGA GGATGCGGTG
GGCGCCCTGC GCGCGCAGAT CGCCGACCCG TCGCGCCTCG ATCCCGACGA GCTGGAGATG
CTCTACGAAG CCGTGGCCGC CATGCAGCAG GACCTCAAGC GCCGCCGAGC CGCCCATAAG
CCGCTTTCCC CGCGTTCCTG A
 
Protein sequence
MAGGISEEDI QKVREANDLV EVIGERTPVK QRGRDFWCCC PLHNEKTPSF KIDPALQLWH 
CFGCGEGGDV FGFIMKTEDL SFPEAVRRLA ERAHIDIAES GGRKSIGSSR KARLKAVCDE
TSQFYHCQLM RNPGSDASAA RSYLGARGLG GEVPKTWQLG FAPGHGQLVR HLSAKGFKPD
EMVQANVALS NDGGKLRDRF YNRIMFPIND PQGECIAFGG RVVGKGEPKY LNSQETPLFH
KSQVLYGMDK AKAAMASTGI SVVVEGYTDV IALHEAGVRN AVATLGTALT MRHIRLLSRH
AQHRIVYLFD GDEAGQRAAD RALAFIDDSM TPEAGKSRIE LAAVTLPDNL DPADFVAQRG
AEELQKLIAN AQPLLKYGIE RRLARHDLSR AEGRAAALAD ALQVLAPIKD SMLARDYAVQ
IATSVRAREQ DVIDQLEHLK APKAEGERDD ESAPEGFERA VAPRRPARNL PRAEINRRRF
ERQLLTLAAR RPDLALLHAD ALAQTQWHEQ AHAAIAQSML DVLAEDPAAS SARLVTEASR
ALPDAAAVLT SGTVSETAAP EQLAAFLVEE LAIGDAEDAV GALRAQIADP SRLDPDELEM
LYEAVAAMQQ DLKRRRAAHK PLSPRS