| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Elen_1600 |
|---|
| Symbol | nfrB |
|---|
| ID | 8415899 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Eggerthella lenta DSM 2243 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013204 |
|---|
| Strand | + |
|---|
| Start bp | 1898193 |
|---|
| End bp | 1900328 |
|---|
| Gene Length | 2136 bp |
|---|
| Protein Length | 711 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 645024569 |
|---|
| Product | bacteriophage N4 adsorption protein B |
|---|
| Protein accession | YP_003181957 |
|---|
| Protein GI | 257791351 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.443209 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.00000043363 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGACGAGC AGGTCGTCTA TTGGATCGGC TTCTTCGTTG CGCTCGCGTT CATCGTGTTC
GGCGCGGACG ACGTGCTGTG GGACGTGTTC GCGCTGTTTC GCGGCACGGG CAAGAAGCGC
GTGAAGCTGT CGCTCATCAA CGAGAAGCCG CCGAAGATGC TGGCCGTGGT CATCGCCGCC
TGGCACGAGG ACGCCGTGCT GGGCGAAGTG GTGGACAACC TCGTGGCCTC CGCGCAGTAC
CCGCGCTCGC TGTACCGGGT GTTTTTGGGC GTCTACCCCA ACGATGCGGC TACCGTGGCC
GTGGCTCGCG CGCTCGAGGT GCGCCATGGA GGCACCGTGG TGTGCGTGGT GGGAGACGAT
CCCGGACCCA CGTCGAAGGC CGCCAACATC AACCATACCG TGCGGGCCAT CCGGGAATAC
GAGGCCGAGC GCGACGTGCG CTTCGCGAGC GTCACCATCC ATGACGCGGA GGACGTGGTG
CACCCCAACG AGTTCAAGAT GACGAACTAC TTGATCGACG ACTACGACGC CCTCCAGTTC
CCCGTGTTCC CGCTGCAGCG CATGCCGCGG CTGCGGCTGT TCTTCAAGAC GTTGACCTCG
TCCACCTACG CCGACGAGTT CGCCGAGCAT CACTTCCGCA CCATGGTCAT GCGCGACGAG
CTGGGCTTCG TTCCTTCGGC GGGCACGGGC TTCGCCATCG GCCGGCGCGT CCTCGACGCG
TTTCGCGACG AGGACCTGCT GCCGCGCAAC AGCCTGACCG AGGATTACAA GCTGTCGCTC
ACCTTGCGCA TGCGCGGCTT CCGCGTGCAC TACGTGCTTG AGAAGGTGCC GCGCGTCGAC
GCGCGCGGGC GCACCGTGTG GGACTACATC GCCACGCGCT CGCTGTTCCC GTCGACGTTC
AAGGCGGCGG TGCGGCAGAA AGCGCGATGG GTGTACGGCA TCACGATGCA GAGCGCGAGC
ATGGCCGATG TGTTCGGCAA AAGCGAGCTT ACGTTCGCCG AGCGCACGTT TCTGTACAAG
GGCCTCAAGG CGAAGTTCGC GAACTTCGTG CTGCTGCCGG GCTACGCCGT GCTCGCGTAC
TTCCTCGTGC AGACGTTCGC GCCGCAGCTG GAGCTGCCCG TCATGTACCC CTTGCACAGC
CCTTCGTGGT GGATGTGCGT GTTTCTGCTG TTCATGATGG TGGAACGGCA GGTGCTTCGC
GGACGCGCGC TGGCGAACGT GTACGGCTGG AAGACGATGG CGTTCTCCAT CCTGCTGCCG
CCGCTGTTCC CGCTCAGGCT TCTATGGGGC AACCTCATCA ACATGTGCGC GACGTTTCGC
GCATGGCGGC AGAAGATCGC CTACGTGCTG CTGCGCGGAC GAGAGGCCAA GGCGGCCGCC
GCGCCGGTCG TCGAGCATCG GGGCAACGCG GCAGAGGAGG AGGGCGAAAG AAAGCCTGCA
ACGGACGGAG ACGAGGCGCA AACCTCGAAT GCGACGTCTG CGCAGGAAGG TCCCGCATGG
AACAAGACCG ACCACGAATT TCTCCCCGCT TCGGTGCTCG AACGCTATCG GCGCCTTCTG
GGCGACGCGC TGCTGGAGAG GGGTTTCGTG GAGCCAGGGC ATCTGGAAGA CGCCGTGGGA
TCGGCGCGTG CGCGCGGCGT GCGGTTGGGG CAGGAGCTGC TGAGGCAGGG ATTGGTCGAA
GAGAGGCACC TCACGCAGGC TTACGCCTTG CAGCAGCAGT CGATGTACGT GCGTGCACAG
CCCGACCTCG TGCTTCTGGA GCTGATGGAT CGCATGCCGT TCGCCGCGGC GGATCGGTTC
GCCGCGCTGC CGCTGGTCGA GAGCGAAAAA GGATGGATCG TCGCCGTGGA CGACGACCTT
TCTTGCGCGG AGCGAGACGA ACTGGCGTTT CTGCTGGGCG AACCGACGTT CTTCCTGTTC
TCCAGCACAG CCGACCTGCT CGAAGCGTTC GAAGGCGCTC TCGCGTTCGA CAACGCGGCG
GAAGCTCCGC AACCTGCCGG GGCGGCGACG CTTCTGGAGG AGACGAGCGT AGAGCTGCCA
CAGGCGGGCA TGGCGCTAGC TTACGCGCTG CATCTCGGCC GCTCGGTCGA CGACATCGCT
TGCGAGATGG GCCTCGCCGT GTCGCGTTTC TCCTAG
|
|---|
| Protein sequence | MDEQVVYWIG FFVALAFIVF GADDVLWDVF ALFRGTGKKR VKLSLINEKP PKMLAVVIAA
WHEDAVLGEV VDNLVASAQY PRSLYRVFLG VYPNDAATVA VARALEVRHG GTVVCVVGDD
PGPTSKAANI NHTVRAIREY EAERDVRFAS VTIHDAEDVV HPNEFKMTNY LIDDYDALQF
PVFPLQRMPR LRLFFKTLTS STYADEFAEH HFRTMVMRDE LGFVPSAGTG FAIGRRVLDA
FRDEDLLPRN SLTEDYKLSL TLRMRGFRVH YVLEKVPRVD ARGRTVWDYI ATRSLFPSTF
KAAVRQKARW VYGITMQSAS MADVFGKSEL TFAERTFLYK GLKAKFANFV LLPGYAVLAY
FLVQTFAPQL ELPVMYPLHS PSWWMCVFLL FMMVERQVLR GRALANVYGW KTMAFSILLP
PLFPLRLLWG NLINMCATFR AWRQKIAYVL LRGREAKAAA APVVEHRGNA AEEEGERKPA
TDGDEAQTSN ATSAQEGPAW NKTDHEFLPA SVLERYRRLL GDALLERGFV EPGHLEDAVG
SARARGVRLG QELLRQGLVE ERHLTQAYAL QQQSMYVRAQ PDLVLLELMD RMPFAAADRF
AALPLVESEK GWIVAVDDDL SCAERDELAF LLGEPTFFLF SSTADLLEAF EGALAFDNAA
EAPQPAGAAT LLEETSVELP QAGMALAYAL HLGRSVDDIA CEMGLAVSRF S
|
|---|
| |