Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Elen_1559 |
Symbol | |
ID | 8415857 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Eggerthella lenta DSM 2243 |
Kingdom | Bacteria |
Replicon accession | NC_013204 |
Strand | + |
Start bp | 1854105 |
End bp | 1855139 |
Gene Length | 1035 bp |
Protein Length | 344 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 645024527 |
Product | pseudouridine synthase, RluA family |
Protein accession | YP_003181916 |
Protein GI | 257791310 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.627219 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.0055148 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCCGCA TGTTGAGCTA CGTCGCAGCA CCCGACGACG CGGGTCAGCG CCTCGATGCG CTTTTGGCCG CGCGCGGTCT GTATCCCAGC CGTAGCGCGG CTGCGCGCGC GGTGGACGAC GGCCTCGTGT TCGTGAACGG CGCGGAGGTT GCGAAGAAGC ATCCCGTGGC GCCGGGCGAC ACGATCGTGT ACCAGGTTGA GGAGCCGGTA GAGCCCGGCC CTTTGCGCGG CCAACCCATC GATCTGGACA TACGCTTCGA GGACGAAGAC CTCATCGTGC TGTCGAAGCA GGTGGGGCTC GTGTGCCATC CGTCGGTCGA CCATGACGAC GGCACGCTGG TGAACGCCCT CATCTACCAC TGCGGCGCCG AGAACCTGTG CAACGTGCAG GGCGAGGACG ACCGTCTGGG CATCGTGCAC CGCCTCGACC GCGACACGAG CGGCCTCATG CTGGCGGCGA AGAACGACGA GACGGGCTAT GCCCTCATGT CGGACATCCG CGATCGCGCG GTCGACCGAC GTTACCTGGC GCTCGTGCAC GGCGTGATCG CCCACGACAC CGGTATGATC GACGCTCCCA TCGCGCGCGC CGAGAAGGAG CGCACGCGCA TGGCCGTCCG CGACACGCCG TCGGCTCGCG AGGCCATCAC GACGTTTCGG GTGCTCGAGC GCTTCGAGCA CGGGGCGCGC GACGACGGCT ACACGCTCAT CGACTGCAAG CTGTTCACAG GGCGCACCCA TCAGATACGC GTGCATCTGG AGTACGCGAA GCACCCTCTT GTGGGCGACC CGGCGTACAC GTCGGGCGCG CCGAGCGCGC CTGCGGCCGA CCTCGGCCTC GACCGCCAGT TCCTGCACTC GTTCCAGCTG TCGTTCCAGC ATCCCGTCAC GGGGGAGGGC CTGCGCTTCG CGGACAACCT GCCCGTCGAC CTGCAGGAAG CGCTCGACGA CCTCGCCTCC CGCAGCACGG GCCGCACGAC GGCGGGGGAG GAAGTGCGAG CGTTGCTGGA AGACGCCCCG AGGCCGCGGC TGTAG
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Protein sequence | MSRMLSYVAA PDDAGQRLDA LLAARGLYPS RSAAARAVDD GLVFVNGAEV AKKHPVAPGD TIVYQVEEPV EPGPLRGQPI DLDIRFEDED LIVLSKQVGL VCHPSVDHDD GTLVNALIYH CGAENLCNVQ GEDDRLGIVH RLDRDTSGLM LAAKNDETGY ALMSDIRDRA VDRRYLALVH GVIAHDTGMI DAPIARAEKE RTRMAVRDTP SAREAITTFR VLERFEHGAR DDGYTLIDCK LFTGRTHQIR VHLEYAKHPL VGDPAYTSGA PSAPAADLGL DRQFLHSFQL SFQHPVTGEG LRFADNLPVD LQEALDDLAS RSTGRTTAGE EVRALLEDAP RPRL
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