| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Elen_1482 |
|---|
| Symbol | |
|---|
| ID | 8415780 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Eggerthella lenta DSM 2243 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013204 |
|---|
| Strand | - |
|---|
| Start bp | 1771263 |
|---|
| End bp | 1772300 |
|---|
| Gene Length | 1038 bp |
|---|
| Protein Length | 345 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 645024450 |
|---|
| Product | transcriptional regulator, AraC family |
|---|
| Protein accession | YP_003181839 |
|---|
| Protein GI | 257791233 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 49 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTACGACA GGGAAACGAT GTTCTCCCAC GCCGCCCAAG CCGCGGCGGA GACCTTTGCG
GCCTCGCTTG AGCCAATCGG CCTCGTCTTG GCGGACGGTT GGAACGGCGA GGGAGCCCTC
TTCGAAGGCG ACGGATGCCG ATGCGAGGGG TGGTACTGGG CGTGGGAGGC GCGGCGGTTC
TTCTCCGTCG TCTGCTGCGA TTTCACTTTG AAAGAACCCC TGCCCTTCTG TTTCGATTCT
GGCGGTTATT TCGCCGTCCG CCGCGAAAGA CATGGCCTCA TGCCGCAATC AAGCGTTTCC
GCCTTTCTGG AAGCAAAGCC CAAGACAAGC TCGATCCTGC TTCCAAAAGA AGCGAGATTC
TCTTACACGG AGATCGAGTA CTACGACGAA TACTGTCAAA GCGTCTTCGG GGAAAGAATC
GACAAGGCGC TAAAACCGCT AGCGACCAGC CTGAAGGGTC TTAGGAACCA GGCTTCCTGG
GATCCGGAAA TAGCGGAGAT GCTCGGCGAG ATAACTCCAA GGGAGATCCC GGGGCCGGAA
GCGAGCCTCC TGTATTCCGG AATCGCGAAC TTGGTGATGG CAAGGCTGCT CAGGATGGGA
GAGAGCCTGT GCGAGGGAGT GGCCGAGCAG GACCGCCTTT CGATCGCGAG AGCCGTATCG
TACATCGAGA ACAACCTAGG CGGTGCGATC AGGCAGAAGG ATCTGCTCGA GGCCGCGAAC
ATGGGGTCAA CCAAATTCAA GAAGACATTC AAGCAGGTGA CGGGATTGAC AGTGACCGAG
TTCGTCTCCT CGGAAAGAAT CGAGCTGGCG AAAAGACTGC TCACCGACCA TGATATGAGC
ATAGACGAGG TAGCGCATCG TTGCGGGTAT GCACGAGCAA CAAGCTTTTC CGCCCTCTTC
GCGAAATCGG TCGGCATGCC CCCACGCAAG TGGAGATCGA TCGCGAAGGT CGCTTTCGAT
GACGACCCGG AATCGAAATT ACTGGGTGTT CTCGCAAGCG GGCGCTCCTG CGTCAGCGAG
GCGGAATCTC ATTCTTAG
|
|---|
| Protein sequence | MYDRETMFSH AAQAAAETFA ASLEPIGLVL ADGWNGEGAL FEGDGCRCEG WYWAWEARRF
FSVVCCDFTL KEPLPFCFDS GGYFAVRRER HGLMPQSSVS AFLEAKPKTS SILLPKEARF
SYTEIEYYDE YCQSVFGERI DKALKPLATS LKGLRNQASW DPEIAEMLGE ITPREIPGPE
ASLLYSGIAN LVMARLLRMG ESLCEGVAEQ DRLSIARAVS YIENNLGGAI RQKDLLEAAN
MGSTKFKKTF KQVTGLTVTE FVSSERIELA KRLLTDHDMS IDEVAHRCGY ARATSFSALF
AKSVGMPPRK WRSIAKVAFD DDPESKLLGV LASGRSCVSE AESHS
|
|---|
| |