Gene Elen_1444 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_1444 
Symbol 
ID8415742 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp1723386 
End bp1724489 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content59% 
IMG OID645024413 
Producthypothetical protein 
Protein accessionYP_003181802 
Protein GI257791196 
COG category[S] Function unknown 
COG ID[COG4905] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.06251 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.227287 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAAAG ACTTCAGCAA CCCGAAGAAG CTCGGCTTCA TGCGGGTCCT CCAGTTCTTC 
TTTGCATTCA ACGTCATCGT CACCATCTCG CTGTTGGCGT TCCTGATCAA AGGCAGCTAC
GAGCTGGAAT TCTCGAACAT CCTCGATTTC GTCAACCTGA TATTCGACAG CATCAGCTTC
TGGCTCATCT GGCAGCGCAA ACGCCTGGCG CGCCATTTCA TCATCGGGTT CAGCTTGTTC
AACATCTTCA TCGGAACCGC CTTCAACATC GCGACCGGTC ACTTCAGCCT TGTCGGCCAG
CTGTTCTCGT GCACGCCCGA CCTTATACTG CTCGCGTACT TCCTCACGTC GAGACGCGCG
AAAGCCGTGC TGACGCAGCC CTTCGACGCA GAGGTCAAAC AACGCGAGCT CGCGAAGGAC
CTGGACTGCT ACCAGCCTCG GACCTGGGCG TTCTGGCGCA ACATCATCAT TTACTTCTGC
GTGTTCAGCG TGGTGGGACA CTGGATGGAG GCGGCCTATT GCACGCTCAT CCGCTTCGGA
ATGATACCCG GCACCTACGA CCCGAACTCC CAGATCTGGT CGGATTGGCT CTACCCCTTC
ATCGTGTACG GATTCGGAGC CGTGGCGTGC GTGCTTCTGC TGTACCCCGT CAAGAACTTC
CTTGAAAAGC GCATCCGCAG CCGCGTGGTG CCCTTGCTCA TCAGCTTCGT CGTTAACGCG
CTCGTCTGCA CGACCATCGA ACTGGTCATG GGCCTCATGG TCAACCAGCC CGGCCCTGAC
GGCAAGCTGC CCTTATGGGA CTACTCCGAT ATGTTCTGCA ACTTCATGGG CCAGGTGTGT
CTGCAGAACG CCATCGCCTT CGGCGTGGTG GCCACGCTCA TGACCTGGGT GATCTACCCG
GCGCTCGAGC AGCTGCTGAG CAAGGTCCCC CGGGACGGCA TGAACATCGC CTTCATAGCC
GTGACCGTCG GCTTCTGCAT CCTGATCTTC CTGTACTACG TGAACGTGGC GCTTCCCGAC
CTCGACGACG CCGACGATGC CGGCTCCTCG GACGCAACCT CGATCGAGCT CTCGTCCAGC
TACGATTCTG AAGCGGCCGG CTAG
 
Protein sequence
MAKDFSNPKK LGFMRVLQFF FAFNVIVTIS LLAFLIKGSY ELEFSNILDF VNLIFDSISF 
WLIWQRKRLA RHFIIGFSLF NIFIGTAFNI ATGHFSLVGQ LFSCTPDLIL LAYFLTSRRA
KAVLTQPFDA EVKQRELAKD LDCYQPRTWA FWRNIIIYFC VFSVVGHWME AAYCTLIRFG
MIPGTYDPNS QIWSDWLYPF IVYGFGAVAC VLLLYPVKNF LEKRIRSRVV PLLISFVVNA
LVCTTIELVM GLMVNQPGPD GKLPLWDYSD MFCNFMGQVC LQNAIAFGVV ATLMTWVIYP
ALEQLLSKVP RDGMNIAFIA VTVGFCILIF LYYVNVALPD LDDADDAGSS DATSIELSSS
YDSEAAG