| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Elen_1343 |
|---|
| Symbol | |
|---|
| ID | 8415641 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Eggerthella lenta DSM 2243 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013204 |
|---|
| Strand | - |
|---|
| Start bp | 1608740 |
|---|
| End bp | 1610881 |
|---|
| Gene Length | 2142 bp |
|---|
| Protein Length | 713 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 645024312 |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_003181701 |
|---|
| Protein GI | 257791095 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0921834 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.552971 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGAAGC GCATAGATGG GTCGTCTCTG GCGGAGGCCC CCGTCTGGCT CAAAGCGGTA
AGCGGGCTGC TCTTGGCGAT GCTGCTGGTC TCGGTTTTCG CCTTCGCGGG AACGTACAGC
AACCTCAACC AGTCGATCAA CGAGGAGCGC GTCGAGTCCG TGCAGCAGAT CGGCAGCCTG
ATCTCGAAGA AGCTCAAGCT GCTCAAGCAA GGTCACGAGG AGGACGCCGA AATGTCGGCG
CGTTTCCTCA CGCACTCCGG CGCGATCACC ATGGAGGAGG TGAAGAGCCT CCTCGGCGAC
TCGAACGAGA CGTACCTGCT TGCCGAGGAC GGGAGGTGCT TGTCGCTTGA AGGGCAGGCC
ATCGTCATAT CGAGCACCAT GCTCACCGAG AACATCCATA CCTGGGAAGA CGTGAAATCC
GAGTTCTGCA CCGTGCAAAG CAAAGGCGAT TTCTGGGTGT TCGCGGCACC CGTCGAAGGC
GTCGTCGTCG ACGGCATGCC CATCGCAGGC CTTCTCAAGG TGGTGGATGC CCAGCAATAC
GCCGACGTGG CCATCCTCCC CATCTTCAAC GGCCAGGGCG CATCGTATGT CGTGGACGAG
AACGGCGTGA TCCTGCTGAG GCCTTCGGAT TCCCAAGCCA ACAAGAGCTT CGAAAGCCAC
AACATCGTGC AGATCCTCGA AAAGGAGCAC GTTGATCAAG CTGTGGTGGA CACGCTGAGA
TCTTCCCTGA AAAACTGCAC GGAAGCTCAA TTCCTCATGA GCTTCCAAGG CGACACGTGG
CTTCTGCAAA GCTTCCCCGA CGGCGAGGGC CGCAACATCG TCATGGCCAT CCCCGTTTCG
AGAACCGCTC AAAAGACCTT CGAGGGCATG CAGAGCGTCA TCGGGCTGGT TGCGGTCATC
GTGCTGATAG TCGCGATGCT TTCGATCAGC TGGATGTACT ACTTCGTAAG CAGGAACCAG
AAAGTCAAGA TAGAGAGCGC GCGCGTGAAC CTGAAGAGCG ACTTCTTGAC CAAGATGTCG
CATGACATAC GCACGCCGCT CAACGCCATC ATGGGATCCA ACGAATTGGC CCTGCGTTCC
ATAGACGATT CAAAGACCCT GAAAAAACAC CTGGAAACCT CGAGGAAATC CGGGGAGTAC
CTGCTCTCCA TCATCAACGA CATGCTGGAT CTGAGCCGCA TAGAAAGCGG AAAGATGACC
ATGGCGAACC GTCCGTTCGC ACTGCCCGAT CTTCTGGATT CCATCATCGT TTTGCAAAGC
GGTCCTGCCG AGAAGAAGGG CGTGGTGCTC AAGGAGTCTT CGCGCCATCT TGTTCACGAG
CGCTTCCTCG GCGACGACAC CAGAATCAAG CAATGTTTGG TCAACCTGGT TTCGAACGCG
GTGAAATTCA CGCCCGAGCA AGGAACCGTC CTGGTTTCTT GCGAAGAGCT CGCACAGGAA
GGGTCGGATT CGCGCATACG GTTCACCGTG AAGGACACCG GCATCGGCAT GAGCGAGTCG
TTCATGAAAA GGCTGTTCGA GCCGTTCGAG CAAGAGCAAT CATCCCTCAC CTCCACCCAG
ATCGGCAGCG GATTGGGGCT TCCCATCGTG CACAACCTGG TGAGCCTGAT GGGCGGTACC
GTGCACGTCG AAAGCGCACA GGACGCAGGC ACTACCTTCG TGGTGGAGAT ACCGTTGAAG
CCCCTCGACG AGCCATGCCG CCCCGCAGAC GACCGCGATT CGGAAACCCC GAGACCGGAC
TACAGCGGCA CGTGCATCCT GTTGGCGGAA GACAACGAGA TGAACCGCGA GATCATCGTC
GATCTGCTCT CCGATCTCGG CGTTGACGTG GAAACGGCAT GCAACGGCGC CGAAGCGCTC
GAAATGGTCG CCTCCTCCGA GCCCGGGCGC TACGCACTCG TGCTCATGGA CATCCAGATG
CCCGTCATGA ACGGACTCGA AGCCGCATCC GCCATCAGGG CGTCGGGCCA TCCCGACGCG
GCGCGCCTTC CCATCATCGC GCTTTCGGCA GGCGCATTCG AAGAGGACGT GCAGCGTTCC
CTGCACCATG GCATGCAGGA TCATTTGTCC AAACCGATGA ATCTCGACGA CGTTCGCGAC
GTATTCCATC GCTTTATAGA CCAACAGGAG GAACCGCAAT GA
|
|---|
| Protein sequence | MTKRIDGSSL AEAPVWLKAV SGLLLAMLLV SVFAFAGTYS NLNQSINEER VESVQQIGSL
ISKKLKLLKQ GHEEDAEMSA RFLTHSGAIT MEEVKSLLGD SNETYLLAED GRCLSLEGQA
IVISSTMLTE NIHTWEDVKS EFCTVQSKGD FWVFAAPVEG VVVDGMPIAG LLKVVDAQQY
ADVAILPIFN GQGASYVVDE NGVILLRPSD SQANKSFESH NIVQILEKEH VDQAVVDTLR
SSLKNCTEAQ FLMSFQGDTW LLQSFPDGEG RNIVMAIPVS RTAQKTFEGM QSVIGLVAVI
VLIVAMLSIS WMYYFVSRNQ KVKIESARVN LKSDFLTKMS HDIRTPLNAI MGSNELALRS
IDDSKTLKKH LETSRKSGEY LLSIINDMLD LSRIESGKMT MANRPFALPD LLDSIIVLQS
GPAEKKGVVL KESSRHLVHE RFLGDDTRIK QCLVNLVSNA VKFTPEQGTV LVSCEELAQE
GSDSRIRFTV KDTGIGMSES FMKRLFEPFE QEQSSLTSTQ IGSGLGLPIV HNLVSLMGGT
VHVESAQDAG TTFVVEIPLK PLDEPCRPAD DRDSETPRPD YSGTCILLAE DNEMNREIIV
DLLSDLGVDV ETACNGAEAL EMVASSEPGR YALVLMDIQM PVMNGLEAAS AIRASGHPDA
ARLPIIALSA GAFEEDVQRS LHHGMQDHLS KPMNLDDVRD VFHRFIDQQE EPQ
|
|---|
| |