Gene Elen_1331 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_1331 
Symbol 
ID8415629 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp1594453 
End bp1595625 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content69% 
IMG OID645024300 
ProductPrephenate dehydrogenase 
Protein accessionYP_003181689 
Protein GI257791083 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0287] Prephenate dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.762233 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.318858 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACACC AGCATACAAC GCAACCTGAT CAGGCGTTTC GCCGTATAGC GGTGGTAGGT 
TTCGGACTGG TGGGCGCCTC GTTCGCCGCC GCTGTGCGCG CGGCGTATCC CGACACGCGG
GTGCTGGCTG TCGACATCGA CGAACGCACG CTGGCCGAAG CCGTCGAGCG CGGCTGGGCC
ACGGACGGCG CGCTGCCCGA CGACCCTGCG TTCGAACGCT TCGTCGGCGA CGGCTGCGAC
CTCGTGGTGC TCGCTACGCC CGTCGGCGCG GCGGAGCGCT ACTTCGAAGA CCTCGCGCGG
TGGGGCTATC GCGGCATCGT CACCGACACC GCCTCCACGA AAGCGCGCAT CACGGCTTTG
GCCGAGCGCG TCCTGCCGCA TCCCGAGAAC TTCGTGCCCG GGCATCCCAT GGCCGGCTCG
GAGGTGAACG GCATCGAAGG CGCGCGACCC GACCTGTTCA AGGGCGCGCA CTGGATCCTC
TGTCCCGACG CCGACACGCC CGCCGAGCAC TTCCCGCGCC TGCACGAGCT GGTCACCTCC
ATCGGCGCGC GCGTCATCGC GCTGCCGCGC GAGGACCACG ACGAGGCGGT GGCCGTGGTC
AGCCACGTGC CGCATATTAT GGCGTCCTCG CTCGTGCAGC TGGCCAGCCG CCACGCCGAC
GACCAGCAGG CGCTCATGCG CCTGGCCGCC GGAGGCTTCA AGGACTCCAC GCGCATCGCG
GCCGGTTCGC CCGAGCTGTG GTGCGGCATC GCCTTCGACA ACAAGGACGC GCTGTCCGAC
GGGCTCGACG AGATCCAGGG CATCATCGGC GCGTTCGCCG ACGCGCTGGC ATCCGACGAC
CGCGCGTCGC TCACTGCGCT TTTGGCCGAC GCGGCGGCCG CGCGCCGCGC GCTGCCGGCC
GCCTGGGTGC CCTCGACGGA GCGTCTGCTG GAAGTGCGCA TCCCCATGGA GGACCGTCCG
GGCGTCGTGG CCGAGGTGAC CACCGTCACC AGCTCGGTGG GGTGCAACAT CCAATCCATC
GAGATCGACC ACGTCACGGA GGACAGCGCC GTGCTCAGCC TCGTGCTCAC CGACGAGGGC
GATATCGGCC AGCTGTCCGC CCAGCTCATC AACGCAGGAT TCTCAGTATC GTTCAGTCCC
TTGACGGCAA AGGAGCATAC CCATGTCGCA TGA
 
Protein sequence
MAHQHTTQPD QAFRRIAVVG FGLVGASFAA AVRAAYPDTR VLAVDIDERT LAEAVERGWA 
TDGALPDDPA FERFVGDGCD LVVLATPVGA AERYFEDLAR WGYRGIVTDT ASTKARITAL
AERVLPHPEN FVPGHPMAGS EVNGIEGARP DLFKGAHWIL CPDADTPAEH FPRLHELVTS
IGARVIALPR EDHDEAVAVV SHVPHIMASS LVQLASRHAD DQQALMRLAA GGFKDSTRIA
AGSPELWCGI AFDNKDALSD GLDEIQGIIG AFADALASDD RASLTALLAD AAAARRALPA
AWVPSTERLL EVRIPMEDRP GVVAEVTTVT SSVGCNIQSI EIDHVTEDSA VLSLVLTDEG
DIGQLSAQLI NAGFSVSFSP LTAKEHTHVA