Gene Elen_1159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_1159 
Symbol 
ID8415449 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp1392116 
End bp1393924 
Gene Length1809 bp 
Protein Length602 aa 
Translation table11 
GC content64% 
IMG OID645024121 
ProductBCCT transporter 
Protein accessionYP_003181518 
Protein GI257790912 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1292] Choline-glycine betaine transporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGTCTA AGAGCTCGGA CGACGACGCG CGCAAGCACG TCCACCCCAT GGAGGTGGAG 
AACGAGTCGG GCGAAGTGGA TCCGGAGCCG AAGGAAGCCC AGGCCGCACG GCTCGGACGC
ACGGTCAGGC ATGACCATGT CATCCGAGCC GCGTCGGTGG CCATCGTCGC CGTCGTGCTA
GGCATCGCGC TGGTCAGCGC CGACACGTTC ATCAACGCGG TTGGCGTGCT GCGCACGTTC
GTCACCCAGT ACTGCAGCTG GTGGATCGTG CTGTGCGCGT TTTTGTGCTT CGCCGTATGC
ATATTCGTAG CGGTGACGAA GCTCGGTTCG ATCCGCCTGG GCGGCAAGGA CGCCAAGCCC
GCGTTCTCGT ACTTCTCCTG GTTCGCGATG CTGTTCGCCA CCGGGCAGGG CGTGGGCCTG
GTGTTCTGGG CGGTGGCCGA GCCTATCATG ATGTACGGGG GCACCCCGTT CAACGCCCCC
GACCCCCTGT TCGCCGGAGA CACGGCGCTT GCATGGACGT ATTTCCACTG GGCCATCCCG
GCGTGGGCCA TCTACGCCAT CGTCTCGCTT TTCATGGCTT ACGCCCGCTA CAACATGCAC
AAGGACACCA CGTTCCGCGG CACGGTGGAG GATCTGTTCC CCGCCCGCGC GAAGCGGCCC
GTCGGCATCG TGGTGGAGAT CCTCGTGGTC ATCGCCACCA TCTTTGGGCT GACCACGTCG
CTCGGACTTG CATCGTACCA GTTCAACAGC GGTATTCAAC AGATCTTCAA CATCCAGACG
GGGCAAGCCC TGCAGGTGGC GTTCGTCATC CTGTTCGGAT CCATCGCAAC GATGTCGGTG
TGGTTCGGCG TGGTGAGGGG CATCAAGAAG ATCTCGAACG CGAACGCCGT CATGTCCATC
GTGTTCGTCG CTGCCGTGTT CATTTTCGGC CCCACGCTGT ACATCCTGGG CGTGCTGCCC
GAGTCGCTCA GCGTGTTCAT CGACCAGTTC ATGCTGATGA GCGGGTTCAC CGAAGCCGTG
AACCTGGGCG CGGGCATCGC CTCGTACGGT GATTCCTGGC AGGCGTTCTG GTCGTTCTTC
ATCTTCTGCT GGTGCTTCGC GTTCGCCACG TTCACGGCGG GCTTCGTGTC CACCATCTCC
CGCGGGCGCA CGCTGCGCGA GTTCGTAGGC GGCGTGGTGT TCGTGCCCGC GGCCGTATGC
ATCGTATGGA CGTGCGTGGT GGGCGGCACC GGCGTGTGGG CCGCCATGTC CGACCCCGGC
ATCGTGGCGC AGACCAACGC CGACTCCTCG ATGGGGCTGT TCCTCACCAT CGACAGCGTA
CCTCTGATCG GCGGCGTGCT GACCGTGCTG GCAACCATCC TCATCGGCGG CTATATCGTG
ACCTCGGTGG ACTCCGGCGT CATGGCGCTG TCGAACTTCG TGTCTCCCGC CGCGCGCCAG
AGCCGCGGCT TCAAGGCGCT GCTGGCGCTG TGCATCACGG CGCTCGCCGT GCTGTTCATG
GTGACGGCCG GACAGGACTT CCTCAGCACC ATCCAATTCG CCACCATCGC CGGCGGCATC
CCGTTCAGCG TCATCGTGAT CCTCATGGGC GTCCAGTTCT TCAAATGGGT CAAGCACGAC
GAGCAGCTGG TGGAACGCGG CCTGGCCGAG CCGTTTCCCG AAGACTCGCT TGCGGCCCGG
CAGCTGCGTC AGTGGCACGA GGAGAGGGAG GCGCGCGAAG CCGAGAAGGC ATGGCTCACG
CGGCATGAGG AGGTCGACGT CCCCGACGGA GCCGGCCTCG ACGAATCGAT GAAGGAGGTG
TCGCGATGA
 
Protein sequence
MRSKSSDDDA RKHVHPMEVE NESGEVDPEP KEAQAARLGR TVRHDHVIRA ASVAIVAVVL 
GIALVSADTF INAVGVLRTF VTQYCSWWIV LCAFLCFAVC IFVAVTKLGS IRLGGKDAKP
AFSYFSWFAM LFATGQGVGL VFWAVAEPIM MYGGTPFNAP DPLFAGDTAL AWTYFHWAIP
AWAIYAIVSL FMAYARYNMH KDTTFRGTVE DLFPARAKRP VGIVVEILVV IATIFGLTTS
LGLASYQFNS GIQQIFNIQT GQALQVAFVI LFGSIATMSV WFGVVRGIKK ISNANAVMSI
VFVAAVFIFG PTLYILGVLP ESLSVFIDQF MLMSGFTEAV NLGAGIASYG DSWQAFWSFF
IFCWCFAFAT FTAGFVSTIS RGRTLREFVG GVVFVPAAVC IVWTCVVGGT GVWAAMSDPG
IVAQTNADSS MGLFLTIDSV PLIGGVLTVL ATILIGGYIV TSVDSGVMAL SNFVSPAARQ
SRGFKALLAL CITALAVLFM VTAGQDFLST IQFATIAGGI PFSVIVILMG VQFFKWVKHD
EQLVERGLAE PFPEDSLAAR QLRQWHEERE AREAEKAWLT RHEEVDVPDG AGLDESMKEV
SR