Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Elen_1159 |
Symbol | |
ID | 8415449 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Eggerthella lenta DSM 2243 |
Kingdom | Bacteria |
Replicon accession | NC_013204 |
Strand | - |
Start bp | 1392116 |
End bp | 1393924 |
Gene Length | 1809 bp |
Protein Length | 602 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 645024121 |
Product | BCCT transporter |
Protein accession | YP_003181518 |
Protein GI | 257790912 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1292] Choline-glycine betaine transporter |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGTCTA AGAGCTCGGA CGACGACGCG CGCAAGCACG TCCACCCCAT GGAGGTGGAG AACGAGTCGG GCGAAGTGGA TCCGGAGCCG AAGGAAGCCC AGGCCGCACG GCTCGGACGC ACGGTCAGGC ATGACCATGT CATCCGAGCC GCGTCGGTGG CCATCGTCGC CGTCGTGCTA GGCATCGCGC TGGTCAGCGC CGACACGTTC ATCAACGCGG TTGGCGTGCT GCGCACGTTC GTCACCCAGT ACTGCAGCTG GTGGATCGTG CTGTGCGCGT TTTTGTGCTT CGCCGTATGC ATATTCGTAG CGGTGACGAA GCTCGGTTCG ATCCGCCTGG GCGGCAAGGA CGCCAAGCCC GCGTTCTCGT ACTTCTCCTG GTTCGCGATG CTGTTCGCCA CCGGGCAGGG CGTGGGCCTG GTGTTCTGGG CGGTGGCCGA GCCTATCATG ATGTACGGGG GCACCCCGTT CAACGCCCCC GACCCCCTGT TCGCCGGAGA CACGGCGCTT GCATGGACGT ATTTCCACTG GGCCATCCCG GCGTGGGCCA TCTACGCCAT CGTCTCGCTT TTCATGGCTT ACGCCCGCTA CAACATGCAC AAGGACACCA CGTTCCGCGG CACGGTGGAG GATCTGTTCC CCGCCCGCGC GAAGCGGCCC GTCGGCATCG TGGTGGAGAT CCTCGTGGTC ATCGCCACCA TCTTTGGGCT GACCACGTCG CTCGGACTTG CATCGTACCA GTTCAACAGC GGTATTCAAC AGATCTTCAA CATCCAGACG GGGCAAGCCC TGCAGGTGGC GTTCGTCATC CTGTTCGGAT CCATCGCAAC GATGTCGGTG TGGTTCGGCG TGGTGAGGGG CATCAAGAAG ATCTCGAACG CGAACGCCGT CATGTCCATC GTGTTCGTCG CTGCCGTGTT CATTTTCGGC CCCACGCTGT ACATCCTGGG CGTGCTGCCC GAGTCGCTCA GCGTGTTCAT CGACCAGTTC ATGCTGATGA GCGGGTTCAC CGAAGCCGTG AACCTGGGCG CGGGCATCGC CTCGTACGGT GATTCCTGGC AGGCGTTCTG GTCGTTCTTC ATCTTCTGCT GGTGCTTCGC GTTCGCCACG TTCACGGCGG GCTTCGTGTC CACCATCTCC CGCGGGCGCA CGCTGCGCGA GTTCGTAGGC GGCGTGGTGT TCGTGCCCGC GGCCGTATGC ATCGTATGGA CGTGCGTGGT GGGCGGCACC GGCGTGTGGG CCGCCATGTC CGACCCCGGC ATCGTGGCGC AGACCAACGC CGACTCCTCG ATGGGGCTGT TCCTCACCAT CGACAGCGTA CCTCTGATCG GCGGCGTGCT GACCGTGCTG GCAACCATCC TCATCGGCGG CTATATCGTG ACCTCGGTGG ACTCCGGCGT CATGGCGCTG TCGAACTTCG TGTCTCCCGC CGCGCGCCAG AGCCGCGGCT TCAAGGCGCT GCTGGCGCTG TGCATCACGG CGCTCGCCGT GCTGTTCATG GTGACGGCCG GACAGGACTT CCTCAGCACC ATCCAATTCG CCACCATCGC CGGCGGCATC CCGTTCAGCG TCATCGTGAT CCTCATGGGC GTCCAGTTCT TCAAATGGGT CAAGCACGAC GAGCAGCTGG TGGAACGCGG CCTGGCCGAG CCGTTTCCCG AAGACTCGCT TGCGGCCCGG CAGCTGCGTC AGTGGCACGA GGAGAGGGAG GCGCGCGAAG CCGAGAAGGC ATGGCTCACG CGGCATGAGG AGGTCGACGT CCCCGACGGA GCCGGCCTCG ACGAATCGAT GAAGGAGGTG TCGCGATGA
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Protein sequence | MRSKSSDDDA RKHVHPMEVE NESGEVDPEP KEAQAARLGR TVRHDHVIRA ASVAIVAVVL GIALVSADTF INAVGVLRTF VTQYCSWWIV LCAFLCFAVC IFVAVTKLGS IRLGGKDAKP AFSYFSWFAM LFATGQGVGL VFWAVAEPIM MYGGTPFNAP DPLFAGDTAL AWTYFHWAIP AWAIYAIVSL FMAYARYNMH KDTTFRGTVE DLFPARAKRP VGIVVEILVV IATIFGLTTS LGLASYQFNS GIQQIFNIQT GQALQVAFVI LFGSIATMSV WFGVVRGIKK ISNANAVMSI VFVAAVFIFG PTLYILGVLP ESLSVFIDQF MLMSGFTEAV NLGAGIASYG DSWQAFWSFF IFCWCFAFAT FTAGFVSTIS RGRTLREFVG GVVFVPAAVC IVWTCVVGGT GVWAAMSDPG IVAQTNADSS MGLFLTIDSV PLIGGVLTVL ATILIGGYIV TSVDSGVMAL SNFVSPAARQ SRGFKALLAL CITALAVLFM VTAGQDFLST IQFATIAGGI PFSVIVILMG VQFFKWVKHD EQLVERGLAE PFPEDSLAAR QLRQWHEERE AREAEKAWLT RHEEVDVPDG AGLDESMKEV SR
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