Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Elen_1116 |
Symbol | |
ID | 8415406 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Eggerthella lenta DSM 2243 |
Kingdom | Bacteria |
Replicon accession | NC_013204 |
Strand | + |
Start bp | 1345995 |
End bp | 1346900 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 645024078 |
Product | Rhamnulose-1-phosphate aldolase |
Protein accession | YP_003181475 |
Protein GI | 257790869 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases |
TIGRFAM ID | [TIGR02624] rhamnulose-1-phosphate aldolase |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000171192 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000000000000494113 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGGTTTCT TCGACAATGC GCAGGAAGTG CTCGACCGCG GCGTGTCGGC GGCGAAGGGC GCCGTCTCGG GCGTGGCGGT GGAGCAGCAG GCGTTCGTGA AAGGGTTCGC TCGTCTGTGC AGCGAGGGCT CGAGCCAGGG ATGGCATGAG AGCAACGGCG GCAACGCGTC GTACCGGCTT GCGCCGGAGG ACGTGGCATC CAGCCGCTCG TTCTTCTACG ACAATCCCAG CTCGTGGGTG CCGCTAGGCG TGCAGGTCGC CAACCTGGGC GGTGAGTTCT TCCTGGTGAC GGCCGCGGGA GCGCACATGC GCAACGTGGC GCTGGACCCC GACACGGGCG CGGGCATCGT GGAGGTCAAC GCCGCGGGCG ACGCGTGGCG CATCGTGTGG GGTTTCAAGA ACGGCGGCGT GCCCACGAGC GAGTTCCCCA GCCACGCAGC CATCCAGTCG GTACGCAGGG AGACGACCGG CGGCACGGGC CGGGTGCTGT ACCACGCCCA TCCCGCAAAC GTGGTGGCGC TGACCAACGT GCTGCCGCTC GATGCGCGCA CGTTCACCCG TGCGCTGTGG AAGATGCTGA TGGAGGCCAT GATCGCGTTT CCGAAGGGCA TCGGAGTAGT GCCGTGGATG GTGCCGGGCG GCCCTGAGAT CGCCAGCGCC ACGGCCGACG CCATGCGCGT CTACGACGCA TGCGTTTGGG CTCACCACGG TCTGTTCTGC GCTGGGAACG ACTTCGACTC GACGTTCGGG TTGGCGCAGA CCATCGACAA GGCCGCGACC GTCTACGCGC AGGCGCGCGC GATGAACGGC GGCAGCGACC GGTTCGCCAG CGCCATTCCC GACGAGGGCC TGCGCGGCAT CGCCGAGGCG TACCATCTTC CGGTGAACGA GGCGTTCCTC GCTTAG
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Protein sequence | MGFFDNAQEV LDRGVSAAKG AVSGVAVEQQ AFVKGFARLC SEGSSQGWHE SNGGNASYRL APEDVASSRS FFYDNPSSWV PLGVQVANLG GEFFLVTAAG AHMRNVALDP DTGAGIVEVN AAGDAWRIVW GFKNGGVPTS EFPSHAAIQS VRRETTGGTG RVLYHAHPAN VVALTNVLPL DARTFTRALW KMLMEAMIAF PKGIGVVPWM VPGGPEIASA TADAMRVYDA CVWAHHGLFC AGNDFDSTFG LAQTIDKAAT VYAQARAMNG GSDRFASAIP DEGLRGIAEA YHLPVNEAFL A
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