| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Elen_0388 |
|---|
| Symbol | |
|---|
| ID | 8414672 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Eggerthella lenta DSM 2243 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013204 |
|---|
| Strand | + |
|---|
| Start bp | 498253 |
|---|
| End bp | 498798 |
|---|
| Gene Length | 546 bp |
|---|
| Protein Length | 181 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 645023364 |
|---|
| Product | conserved hypothetical protein, putative amidase |
|---|
| Protein accession | YP_003180767 |
|---|
| Protein GI | 257790161 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1335] Amidases related to nicotinamidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCGCC TGTTGATCGT AGTGGACTAT CAGAACGATT TCGTGGACGG ATCGCTGGGC
TTTCCCGGTG CCGAGCTTCT GGAGGAGCCC ATAGCCGCGA AAATCGAAGA GTACCGCAGC
GCGGCCGACG TGATCGCGTT CACGTTCGAC ACGCATCGTT GCGACTATTT GGAAACCCAG
GAAGGGCGCA ACCTGCCGGT GGAGCACTGC ATCGAGGGCG CGCCCGGACA CGCGCTGTAC
GGGCGCATCG CCGAGCTCAT CCGTCCGACG GACGAGGTGT TCGAGAAGCC TTCGTTCGGT
TCGGCAGACT TGTTCGAATG GTTGCGCGCA GCGCAGCCGC CGTTCAAGAG CATCGAGCTG
GTGGGCCTCG TGTCCAACAT CTGCGTGATC TCGAACGCCG TGCTGGCGAA AGCGGCCTGC
CCCGAGGTGC CCGTCATCGT GGACGCCGCC TGCACCGCTT CGTTCGACGA CTCCCTCAAC
GAGAAGGCCC TCGACGTGCT GGAGGGCCTG CAGGTCCAAG TGACCAACCG GGTTTCGGCG
GCCTAG
|
|---|
| Protein sequence | MKRLLIVVDY QNDFVDGSLG FPGAELLEEP IAAKIEEYRS AADVIAFTFD THRCDYLETQ
EGRNLPVEHC IEGAPGHALY GRIAELIRPT DEVFEKPSFG SADLFEWLRA AQPPFKSIEL
VGLVSNICVI SNAVLAKAAC PEVPVIVDAA CTASFDDSLN EKALDVLEGL QVQVTNRVSA
A
|
|---|
| |