Gene Elen_0170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_0170 
Symbol 
ID8414454 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp237136 
End bp237909 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content67% 
IMG OID645023150 
ProductCarboxymuconolactone decarboxylase 
Protein accessionYP_003180553 
Protein GI257789947 
COG category[S] Function unknown 
COG ID[COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTACGA TCAACGAGCA AGCGCAGGCC TACCGCAAGC GTCTCTTCCC CGGGTTCGAT 
TCGCCGCTCG CGAGCACCGA TCCCGAGTTC GTCGAGCGCC TCGATCGCTT CGCCTTCGGC
GAAGTGCCCG CCAGCGACGA CCTGGACGAC CGCACGCGCA TGATGGCCAT TTTGGCATCG
CTCGTCGGCG CGCAGGCAAT CGACCTGTTC AAGGCCATGG CGAAAGGCGC GTTCAACGTG
GGCCTCACGC CGGTTGAGAT CAAGGAGATC GTCTACCAGG CCACGCCGTA CGTGGGGATG
GGGCGCATGC TGCCGTTTCT GTACGCGGTG AACGAGCTGC TGGAGCATCG CCTCGTGTCG
CTGCCGCTGG AGGGGCAGGC CACCACGACC GAGGACACGC GCCTCGAAGC CGGCGCGCAG
AAGCAGGTGG ACCTCTTCGG GCCGCACATG GCCGACTTCT ACCAGTCGGG TCCCGAGGAA
ACGCGCCACA TCAACCGCTG GCTGGCCGAG AACTGCTTCG GCGACTACTA CACGCGCACG
GGCCTCGACG ACGCGCAGCG CGAGATGATC ACGCTGTGCT TCCTGGCCGC TCAGGGCGGG
TGCGAGCCGC AGCTGGTCAG CCACGCGCAG GCGAACATGC GCGTGGGCAA CGACCGCGCG
TTCCTCATCA AGGTGGTGTC CCAGTGCGTG CCCTACATCG GCTACCCGCG CAGCCTCAAC
GCGCTGCGCT GCATCGACGA GGCCGTCGAG GCGCTCGAGG CCGACGCCGA ATAG
 
Protein sequence
MTTINEQAQA YRKRLFPGFD SPLASTDPEF VERLDRFAFG EVPASDDLDD RTRMMAILAS 
LVGAQAIDLF KAMAKGAFNV GLTPVEIKEI VYQATPYVGM GRMLPFLYAV NELLEHRLVS
LPLEGQATTT EDTRLEAGAQ KQVDLFGPHM ADFYQSGPEE TRHINRWLAE NCFGDYYTRT
GLDDAQREMI TLCFLAAQGG CEPQLVSHAQ ANMRVGNDRA FLIKVVSQCV PYIGYPRSLN
ALRCIDEAVE ALEADAE