Gene Elen_0146 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_0146 
Symbol 
ID8414430 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp202217 
End bp203512 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content60% 
IMG OID645023126 
ProductGeneral substrate transporter 
Protein accessionYP_003180529 
Protein GI257789923 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGATCTA ACGACCAACG TTCCACTATC AGAAAAGTAG CCGTTTCATC GTTCCTTGGG 
AACTTCATCG AATGGTTCGA CTACGCAACC TATTCGTACT TCGCAGTGGT CATCGCCAAC
GTGTTCTTCC CTGGCGACGA CCCGGCGCTT GCGCTCATGC AGACGTTCGC GGTGTTCGCG
CTTTCGTTCC TGCTGCGCCC CATCGGCGCC ATCTTCTGGG GCAGCATGGG CGACAAGAAG
GGCCGCAAGT GGGCCCTGTC CACGTCCATC TTCCTGATGA CCGGCGCTAC CTTCTGCATC
GGCTTGCTGC CGGGCTACCT GGCCATCGGC CTCGCCGCCC CCATCTTGCT GCTGCTGCTC
CGCATGATCC AGGGTTTCTC GGCTTCCGGC GAGTATGCCG GCGCTGCTAC GTTCCTGGCT
GAGTACGCTC CCTCGGACAA GCGCGGCGTG TACTGCTCGC TCGTGCCTGC TTCGACGGCC
GTGGGCCTGT TGGTGGGCTC TACGTTCGCC ACGGTCATGT ACACGATCCT GCCTGACGCA
GCCGTGAACG AGTGGGGCTG GCGCATCCCG TTCCTGTTGG CAGGACCGCT GGGTCTCGTC
GCTCACTACA TTCGTACCAA GCTGGAGGAT TCGCCGACGT ATCAGGAGAT GCAGGCTGCT
ATCTCCAAGA CCGACGACTC GAATCATCCT ATCCGCGACC TGTTCCGTCA TCACACGAAG
GAGCTCATCA TCTCCTTCGG TGCCGCCATG CTGAACGCGG TGGGCTTCTA CGTGGTTCTC
ACGTACTTGC CGGTCTACCT GGAGACGGTG GTCATGATGC CGGCGAACGA ATCGTCGCTG
ATCACCACTA TCTGCCTGGT CGCGTACGTG GCGTTCATCT TCGGCATGGG GCATCTGTCC
GATAAGTTCG GGCGCAAGAA GATGCTCATC ATCGCCTGTG TGTCGTTCAT CGTGCTGACG
GTGCCGGCGT TCATGCTGTT GAACACTGCG CAATTCTTCA CGGTGCTGGC CGTCGAGCTG
GTGCTGTGCC TGGCGCTTAC CATCAACGAC GGTACGCTGT CCAGCTATCT GACCGAGACG
TTCCCGACGG CGGTGCGCTA CACCGGCTTC GCCCTGTCGT TCAACTTGGC GAACGCCCTG
TTCGGCGGTT CCGCCTCGTT CATCTCGACT GCTCTGATCG CCGCTACCGG CTCCGGTCTC
GCGCCTGCCT GGTACATGGT CGGCGTGTCT TGTGTCGCGC TGGTGGCGAT GATACTATCG
CACGAACATA CGGGTAAGGA TCTGTCCGAA GTGTAA
 
Protein sequence
MGSNDQRSTI RKVAVSSFLG NFIEWFDYAT YSYFAVVIAN VFFPGDDPAL ALMQTFAVFA 
LSFLLRPIGA IFWGSMGDKK GRKWALSTSI FLMTGATFCI GLLPGYLAIG LAAPILLLLL
RMIQGFSASG EYAGAATFLA EYAPSDKRGV YCSLVPASTA VGLLVGSTFA TVMYTILPDA
AVNEWGWRIP FLLAGPLGLV AHYIRTKLED SPTYQEMQAA ISKTDDSNHP IRDLFRHHTK
ELIISFGAAM LNAVGFYVVL TYLPVYLETV VMMPANESSL ITTICLVAYV AFIFGMGHLS
DKFGRKKMLI IACVSFIVLT VPAFMLLNTA QFFTVLAVEL VLCLALTIND GTLSSYLTET
FPTAVRYTGF ALSFNLANAL FGGSASFIST ALIAATGSGL APAWYMVGVS CVALVAMILS
HEHTGKDLSE V