Gene Elen_0053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_0053 
Symbol 
ID8414333 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp67427 
End bp68065 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content63% 
IMG OID645023029 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003180436 
Protein GI257789830 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACAGC GGCAGGCGGA CGGCGGGCAG TCGATGGGAT TGCGCGAGCG CAAGCGCCGC 
GCCACGCGGG ACGCCATCGA GCGGGCGGCC ATCGCCTTGG TGAGCGAGCG TGGCTACGAC
AACGTCACCG TGGCGCAAAT ATGCGAGGCT TCTTCCGTGT CCCAAGGCAC GTTCTTCAAC
TACTTCCGCA CGAAAGACGC GGCTATCGTG GGCATCGGCG AGTACGACCT CGATGCCGAC
TCTGTGCGCG CCGCATTCGA TCGCCTCATG CCCTGCTCGA TGCTGCACGC CACGCTCACC
TTGTTCCTCG AGGTGGCGGG ATCGTTCGAT TGGGAAAGCG ACATCGCGGC GCAGCGGATC
GCGCTCGTCA GTGAAACGCC CTCGCTCATG CAGCTGTTCT TGGACAACGC GTTCGGCTTC
GTCAGCGATT TTCGCAATAT CGTGGAGGCG TATTTTGAAG CGAATCCTTC GCTGCGCACA
TGCTCCGATG TTCTGAGCTC GGCGGAAGAG TCGTACATCG TCGTGTCCGA GGCGCTTGAA
GCCGCGAAGT TCGCGCTGTA CCGCGTCGCC GACGATCCGG CGTCCGGCCT GCCCAGTGCA
GACGAAGTAG AAGCGGTGAT CAGGCGCATC GTGGGATAG
 
Protein sequence
MEQRQADGGQ SMGLRERKRR ATRDAIERAA IALVSERGYD NVTVAQICEA SSVSQGTFFN 
YFRTKDAAIV GIGEYDLDAD SVRAAFDRLM PCSMLHATLT LFLEVAGSFD WESDIAAQRI
ALVSETPSLM QLFLDNAFGF VSDFRNIVEA YFEANPSLRT CSDVLSSAEE SYIVVSEALE
AAKFALYRVA DDPASGLPSA DEVEAVIRRI VG