Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Elen_0013 |
Symbol | |
ID | 8414290 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Eggerthella lenta DSM 2243 |
Kingdom | Bacteria |
Replicon accession | NC_013204 |
Strand | + |
Start bp | 16797 |
End bp | 18608 |
Gene Length | 1812 bp |
Protein Length | 603 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 645022986 |
Product | GTP-binding protein TypA |
Protein accession | YP_003180396 |
Protein GI | 257789790 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1217] Predicted membrane GTPase involved in stress response |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR01394] GTP-binding protein TypA/BipA |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.00331586 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAGCAAG AGAACATCCG CAACGTCGCC ATTATCGCGC ACGTTGACCA CGGCAAGACC ACCATCGTCG ACCGCCTGTT GTACGCCAGC GGCGTGTTCC GCGAGAACCA GCAGGTTGAC GAGCGCGTGC TGGACAGCAA CGACCAGGAG CGCGAGCGCG GCATCACCAT CCTGTCCAAG AACATCTCGG TCGTGTACAA CGACGTGAAG ATCAACGTCA TCGACACGCC GGGCCACGCC GACTTCGGCG GCGAGGTGGA GCGCGTGCTG AACATGGCCG ACGGCGCCCT GCTCATCGTG GACGCGTTCG AGGGCCCCAT GCCGCAGACC CGTTTCGTGC TGCGCCACGC GCTTGAGCAG GGCCTGCGCA TCATCCTGGT GGTGAACAAG ATCGACCGTC CGGGCGCGCG CCCCAACGAA GTGGTGGACG AGGTGTTCGA CCTCATGGTG GAGCTCGAAG CATCCGACGC GCAGCTGGAC TTCCCCGTCG TCTACGCCAG TGCCATGAAC GGCTACGCCC GTTTCGCGCC CGACGACGAC AACATGGACA TGATCCCGCT GCTGGAAACC ATCCTCAAGG AGATCCCGGC TCCCGACTGC GAGCCGAACG GCCCGGTGGC GCTGCAGATC TGCACCGTCG ACCATTCCAG CTTCGTCGGC CGCATCGGCG TGGGGCGCCT GTTCTCCGGC ACCATCCATA AAGGCGAGCC CTCGCTGGTC ATCAAGAACG ACGGCACGCG CTACAACACC AACATCAAGC AGGTGTTCAC GTTCGAGGCG CTGGGCAAGA AGGAGCAGCA GGAGGTGCAC GCCGGCGACA TCGTGGCCGT GGTGGGCGTG GAAGACGCTG ACATCGGCGA CATGGTGACC AGTCGCGAGA ACCCCGTGCG CTTCGATCCC ATCCAAGTGG AAGAGCCCAC GATGGCCATC GTGTTCGAGG CATCGTCCAG CCCGCTCGTC GGCCGCGAGG GCGACATCGT GGGAGCGCGC CAGCTCAAGG AGCGCCTGAT GCGCGAGAAG GAGAGCAACA TCTCCATGCG CATCGAGGAG CTTGAGGACA AGTCGGGCGT CGAGGTTGCC GGCCGCGGCC TGCTGCACCT GTCGGTTCTC ATGGAGACGA TGCGCCGCGA AGGATTCGAG TTCCAGGTAG GTCGCCCGCG CGTGCTCATC AAGAAGGACG AGTCCGGCCG CAAGCTGGAA CCCATCGAGG AGGCCACGGT GGACGTGCCC AGCGAGTACG CAGGCAAGGC CATCGAGGTG TTCGGCAGCG CCGGCGGCGA GATGTCCGAC ATGTACCAGC GCGGCGACCA GACGCACCTC GTGTTCAAGA TTCCGTCGCG CGGCACGATG GGATTGCGCA CCCGTCTGCT GAACGTCACG CGTGGCGAAG CCACGATGTT CCATCATTTC TCCGAGTACG GCCCGTATCG CGGCGAGATG AACGGGCGCA AGAACGGCTC GATGATCTCC ATGTCCACCG AGAAGAGCGT CGCGTACGCT CTGGATGCGC TGCAGGAGCG CGGCCGCCTG TTCGTGGGTC CCGGCCAGGA ATGCTACGAA GGCATGATCG TGGGCGAGTC GTCGAAGGAA GGCGACATGG TGGTCAACAT CGCCAAGTCG AAGCAGTTGG GCAACCAGCG TTCGTCGGGC GCCGACAAGG CTATCTCGCT CACGCCGCCC ATCACGTTCA CGCTGGAAGA GGCGTTGGAG TACATCGAGG ATGACGAGCT GGTGGAAGTC ACCCCGCAGA ACATCCGCCT ACGCAAGCGG ATGCTGTCGG CCACCGATCG CAAGAAGGCT GCCAAGAAAT AA
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Protein sequence | MKQENIRNVA IIAHVDHGKT TIVDRLLYAS GVFRENQQVD ERVLDSNDQE RERGITILSK NISVVYNDVK INVIDTPGHA DFGGEVERVL NMADGALLIV DAFEGPMPQT RFVLRHALEQ GLRIILVVNK IDRPGARPNE VVDEVFDLMV ELEASDAQLD FPVVYASAMN GYARFAPDDD NMDMIPLLET ILKEIPAPDC EPNGPVALQI CTVDHSSFVG RIGVGRLFSG TIHKGEPSLV IKNDGTRYNT NIKQVFTFEA LGKKEQQEVH AGDIVAVVGV EDADIGDMVT SRENPVRFDP IQVEEPTMAI VFEASSSPLV GREGDIVGAR QLKERLMREK ESNISMRIEE LEDKSGVEVA GRGLLHLSVL METMRREGFE FQVGRPRVLI KKDESGRKLE PIEEATVDVP SEYAGKAIEV FGSAGGEMSD MYQRGDQTHL VFKIPSRGTM GLRTRLLNVT RGEATMFHHF SEYGPYRGEM NGRKNGSMIS MSTEKSVAYA LDALQERGRL FVGPGQECYE GMIVGESSKE GDMVVNIAKS KQLGNQRSSG ADKAISLTPP ITFTLEEALE YIEDDELVEV TPQNIRLRKR MLSATDRKKA AKK
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