| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1325 |
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| Symbol | |
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| ID | 8414210 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1488505 |
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| End bp | 1489131 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 645022922 |
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| Product | protein of unknown function DUF988 |
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| Protein accession | YP_003180340 |
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| Protein GI | 257785123 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4708] Predicted membrane protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00310144 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000548247 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGCCACAGG TTTCTTCAGC TTATGCAACA AAACAGCGCG CTCAGCGCCT TGCACGTATT
GGTATCATTG CAGCTCTTTA CGCAGCGCTT ACGCTTGCAA CCCTTCTCTT CTTAGGCGGT
CTGGCCTGGG GTCCCGTGCA GTTCCGTATT TCTGAGGCAG TCGTTGTCAT TGCACTTTTT
ACTGCTGATG CAATTCCAGG ACTTACACTC GGTTGCGTTA TCGCCAACCT TGCGAATATG
GTTATTTCCG GCACGGGAGC TTTAGGATTG CTAGACGTTG TTTTTGGTTC CTTAGCAACT
GCCCTTGGTG CATGGTTTAC CTGGAAGAAC AGAAAAAATG TGCCGCTCGC CCTTCTCGGA
CCAGTGCTTG CAAATGCGGT TATTGTTTCT GCGTATCTTC CAATTTTGCT TCAGGGGTTG
GGATTTTACA CAATTCCATT TACTACTATA GAGCTTGATG GATCGTATCC TCTTATGTTC
TTGTTTGGCT TTATTACCAC AGGACTCGGA GAGGCTGTTG TTCTTTATGT ACTTGGTGTG
CCTTTAGCTC GTGCACTTAA GCATTCGCCT TTGCCTCAGC AGCTTGCTTT TTCTGAGGGT
TCTACCACAG AATCAGTAGG GAACTAG
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| Protein sequence | MPQVSSAYAT KQRAQRLARI GIIAALYAAL TLATLLFLGG LAWGPVQFRI SEAVVVIALF
TADAIPGLTL GCVIANLANM VISGTGALGL LDVVFGSLAT ALGAWFTWKN RKNVPLALLG
PVLANAVIVS AYLPILLQGL GFYTIPFTTI ELDGSYPLMF LFGFITTGLG EAVVLYVLGV
PLARALKHSP LPQQLAFSEG STTESVGN
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