| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1322 |
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| Symbol | |
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| ID | 8414207 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1485846 |
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| End bp | 1486343 |
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| Gene Length | 498 bp |
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| Protein Length | 165 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 645022919 |
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| Product | phosphodiesterase, MJ0936 family |
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| Protein accession | YP_003180337 |
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| Protein GI | 257785120 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0622] Predicted phosphoesterase |
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| TIGRFAM ID | [TIGR00040] phosphoesterase, MJ0936 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0695947 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0513289 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCACTTG TAAGGTTTGA CGTAATTTCA GATACGCATG GGTATTTGTC ATCTGAGTTG
CTTGAGGCTC TACAAGGCGC CAATTACATT GTTCATGCAG GGGATATTAC CTCTAACGCC
GATTATCAGA CGTTGCAAAA AATTGCTCCC GTTAAGCTTT GTCTGGGCAA TAATGATTTT
TGCTACAACT ACGGTCCTAT GGTAAAGAAA AAGATTATTT TCTTTGCGGC TGGTCTTAAG
TGGCAGGTAT GTCATTATCG CGAGAGGCTC GACCTCGTTA AATGTAACAT TGCTATTTGT
GGTCATACGC ATAAGCCCCT TTTACAGCGC GACGAGTGGA CTAATACCCT TGTGATGAAT
CCAGGAAGTC CGACCTACCC TCGTGGGCGC GAGGGTGCAA CTATGGGACG TATTATCGTT
GATGAAGAAG CAGCTCAGGT GGTCAGCGCA GAGATTATTA GTCTGTCTTC GCTTGAGGTA
CTTTTTTCTT GTAAATAA
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| Protein sequence | MALVRFDVIS DTHGYLSSEL LEALQGANYI VHAGDITSNA DYQTLQKIAP VKLCLGNNDF
CYNYGPMVKK KIIFFAAGLK WQVCHYRERL DLVKCNIAIC GHTHKPLLQR DEWTNTLVMN
PGSPTYPRGR EGATMGRIIV DEEAAQVVSA EIISLSSLEV LFSCK
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