Gene Apar_1297 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApar_1297 
Symbol 
ID8414181 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAtopobium parvulum DSM 20469 
KingdomBacteria 
Replicon accessionNC_013203 
Strand
Start bp1464631 
End bp1465053 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content45% 
IMG OID645022893 
ProductATP synthase F1, epsilon subunit 
Protein accessionYP_003180312 
Protein GI257785095 
COG category[C] Energy production and conversion 
COG ID[COG0355] F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) 
TIGRFAM ID[TIGR01216] ATP synthase, F1 epsilon subunit (delta in mitochondria) 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.795308 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAGT TGACTTGTCA GTTTGTCAGA CCAGATAAGC TCCTCTACGA AGGAACCGTT 
GAGAGTCTGA TTCTTGCTTC ATCAGATGGA GAGTATGGTG TGTGGCCAGG CCACGCACCA
GAAATCATTG CGCTTGGTGA TGGTGTTGTA AGACTGCACA TGCCTCATCC AGAGTCTGAA
GAAGAATCTA TGACCAAGAT AGTGATTTCT GGTGGATATG CAGAGATTGA TCCAACAGGA
GTCATTATCT TGGCAGATCA TGCTCGTCGT GTTGATGACA TTGATGCAGA TGTTGTGCGC
GAAACAAGAG ACGATGTCAT TGACCAGATG CTTTCTCTTC CAGAAGATGA TAATCGTCGT
GCCTACTACG CAAAAAAGAT AGACTGGTGT AATCTACTTC TGAAGCAAGT GGTTGAGGAG
TAA
 
Protein sequence
MAELTCQFVR PDKLLYEGTV ESLILASSDG EYGVWPGHAP EIIALGDGVV RLHMPHPESE 
EESMTKIVIS GGYAEIDPTG VIILADHARR VDDIDADVVR ETRDDVIDQM LSLPEDDNRR
AYYAKKIDWC NLLLKQVVEE