| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1289 |
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| Symbol | |
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| ID | 8414169 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1446228 |
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| End bp | 1447337 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 645022881 |
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| Product | peptide chain release factor 2 |
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| Protein accession | YP_003180304 |
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| Protein GI | 257785087 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1186] Protein chain release factor B |
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| TIGRFAM ID | [TIGR00020] peptide chain release factor 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.631072 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTGATA CAGAGGTTGT TTCGCTCCAA GCTTTGGCGG AGCGTCTCTT TGAGATAGAA
GGGTATCTTC ATCTCGCTGA GAAGCGTCAG CAAATTTCAG AACTTGAGGC AGAAAGCGCT
CGTCCCAATT TTTGGGACGA CGCTGAAGCT GCACAAAAAA TAATGACTCA GCTAGCGTCG
CTTCGCGATG ATGTCGCTGG TATCGATAGG GCTAAAGAGA AACTTGGTGA TGCTGAGGCT
GCTTTTGAGC TTGGAACAGA GCTGGGAGAC CAAGCATCAT TTGATGAATC TCGCGCGTTG
GCAGTATCTC TCGAAAAAGA CCTTTCAGAA CTTGAACTTT CAAGCTGGTT TACTGATGAA
CTTGACCACG GCGATGCGAT TGTTACCATT AAGCCTGGTC AAGGTGGTCT TGAGTCTCAA
GACTGGTGTG AAATGCTTTT TCACATGTAT CTCAAATATT GTGATCGTCG TGGTTGGAAA
GTTGACATCA ATGATGCACC TGCAGCAGAG GTTATTGGCC TTGACCGCGC AACTTTTACG
GTAAGCGGAA AGAATGCTTA TGGCATGCTT CGTGCAGAAC AGGGCGTGCA TCGTCTTGTA
AGAATTTCTC CTACTGACGA TAAGAAACGT AGACAGACAT CATTTGCTGG TGTAGAAGTT
TTACCTGTTC TTCCTGAAGA TATTGAGGTT GATATTGACC CCAATGATCT GCGTATTGAT
GTCTATCATG CATCTGGTCC AGGAGGCCAA GGAGTTAACA CTACGGACTC GGCAGTTCGT
ATTACACATA TTCCAACAGG AACAGTAGTA ACCTGTCAAA ACGAACGCAG CCAGCTACAG
AACAAAGCTG CGGCAATGAA TATCTTGCGC AGCCGTTTGT ATGAGATTGA AAAAGAGAAA
CGCGAAGCTG AGCTTGACGA GCTCCGTGGT CCAAAGAGAG AAATCTCATT TGGAAATCAA
ATTAGGAGCT ATGTTCTTTA TCCTTATCAG CTCATTAAGG ATTTAAGAAC GGGAGCAGAA
ACAGGAAACG TTGAGTCTGT TTTTTCAGAC GGCGATCTTG ACCAGTTCAT CATTGCGTAT
CATCGCTGGG TTGTTGGTGG AAAGGATTAG
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| Protein sequence | MADTEVVSLQ ALAERLFEIE GYLHLAEKRQ QISELEAESA RPNFWDDAEA AQKIMTQLAS
LRDDVAGIDR AKEKLGDAEA AFELGTELGD QASFDESRAL AVSLEKDLSE LELSSWFTDE
LDHGDAIVTI KPGQGGLESQ DWCEMLFHMY LKYCDRRGWK VDINDAPAAE VIGLDRATFT
VSGKNAYGML RAEQGVHRLV RISPTDDKKR RQTSFAGVEV LPVLPEDIEV DIDPNDLRID
VYHASGPGGQ GVNTTDSAVR ITHIPTGTVV TCQNERSQLQ NKAAAMNILR SRLYEIEKEK
REAELDELRG PKREISFGNQ IRSYVLYPYQ LIKDLRTGAE TGNVESVFSD GDLDQFIIAY
HRWVVGGKD
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