| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1281 |
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| Symbol | |
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| ID | 8414161 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1439506 |
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| End bp | 1440402 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 645022873 |
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| Product | dihydrodipicolinate synthetase |
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| Protein accession | YP_003180296 |
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| Protein GI | 257785079 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
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| TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.168862 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCAACAT TTAAGGGCGT TATTGTTCCT ATGGTCACGC CGTTTAACCG CGATGAAGAG
CAGTCTATCA ACTACGAAGC AGCTGAGCAG CTTCTGGAAA AGCTCATCTC TGAGGGTGCT
GATGGTATCT TTACGTTTGG CTCTAACGGT GAGTTCCATG TTTGTAGTCC TGACGAGAAG
ATCAAGTTCT CCAAGTTTAT TATCGAGAAA ACCGCAGGCC GTCTTCCTGT TTATGTAGGA
ACTGGAGCTT GCTCAACAAA AGAGGCTCTC TATATGAGCC GCGAAGCAGA AGCAATTGGC
GCCGATGCGC TTTCTGTTAT TAATCCTTAC TTCCTGGGTA TTTCTGACCA GCAGTTGATT
GAGTACTTTA AGACTGTTGC TGCAAGTGTC AAAATACCTG TCCTTTTATA TAACATTCCC
AAGGGAACCG GTAAAAATAT TTCTAAAGAG GTTGTTGAGC AGCTGGTGAC CATTGAAAAC
ATCAAGGGCA TTAAGGACAG CTCTGGCAGT ATTGATAATC TCAAGGATTA TCTGGATGCT
GCGGCTGGTC ATGACGTAGA CGTACTTGTT GGCTCTGACG GAAAGATTTC TGAGGCTCAT
GCCCTTGGAG CTCAGGGTGC TATCGCAGGT ACCGCAAATC TTATTACTAA GGTTGTTGTT
GACCTTTGGA GGGCTCTTGA GGCTGGAAAC GTAGAGGAGG CAGCCCGTCT ACAAGCAGAA
ATTGAGCCAA TTCGCGATAT TCTTCACCTT GGAAGTACTC CTCAGACGCT TAAGCGTTCT
CTTGAACTTG CTGGATATTC CGTTGGCCCT GCTCGTTTCC CTGTTACTGA GGTTGCAGAA
GGTATTGACG AGAAAATCTA TGTAATGCTT GACCATTACG GAATTGCTCA TAATTAG
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| Protein sequence | MSTFKGVIVP MVTPFNRDEE QSINYEAAEQ LLEKLISEGA DGIFTFGSNG EFHVCSPDEK
IKFSKFIIEK TAGRLPVYVG TGACSTKEAL YMSREAEAIG ADALSVINPY FLGISDQQLI
EYFKTVAASV KIPVLLYNIP KGTGKNISKE VVEQLVTIEN IKGIKDSSGS IDNLKDYLDA
AAGHDVDVLV GSDGKISEAH ALGAQGAIAG TANLITKVVV DLWRALEAGN VEEAARLQAE
IEPIRDILHL GSTPQTLKRS LELAGYSVGP ARFPVTEVAE GIDEKIYVML DHYGIAHN
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