| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1247 |
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| Symbol | |
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| ID | 8414126 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1396903 |
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| End bp | 1397433 |
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| Gene Length | 531 bp |
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| Protein Length | 176 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 645022839 |
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| Product | holo-acyl-carrier-protein synthase |
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| Protein accession | YP_003180263 |
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| Protein GI | 257785046 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0736] Phosphopantetheinyl transferase (holo-ACP synthase) |
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| TIGRFAM ID | [TIGR00516] holo-[acyl-carrier-protein] synthase
[TIGR00556] phosphopantethiene--protein transferase domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCACTGG CAGGAATAGG TGTAGATATG CTTGAGATTG CCCGCATGCA GCAGGCAATT
GATAAGCGCC CTCACTTTAT TCGCCGCATG TTTACCGATG CCGAGCGTGC GTATTGTGAG
CGTACTGCTC GCCCTGCGGA GCATTATGCT GCTCGTTTTG CGGCAAGAGA AGCTGTGCTC
AAAGCTTTAG GAACGGGTTT CTCGTCTGGT ATTGGTTTTC AGGATGTTTC TGTTGAGAGA
GATCAACTGG GTAGGCCACA AGCTTGTCTA GCTGGTAAGG CTGCACAGAT TGCGGCCGAT
CAAGGCGTGC AAGAGATTGC ACTTTCTATT TCGTACACTA GAGACGTTGC GGTAGCCAAT
GCAGTTGCCG TCACCAATGC TGTAAAACCT AAGGTAGATC AAAAGGAAGA TGCCACCCAA
GAGCTGGCAC GTTCATTCAA AGAAGCTCGT TCTGTGTTGG ATGAGCTTGA GCGCGTGCAA
GAATCTATAA TTGAGACAAC CTTTGATGAT GTTGTTAAAT CTGAGGAGTA A
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| Protein sequence | MALAGIGVDM LEIARMQQAI DKRPHFIRRM FTDAERAYCE RTARPAEHYA ARFAAREAVL
KALGTGFSSG IGFQDVSVER DQLGRPQACL AGKAAQIAAD QGVQEIALSI SYTRDVAVAN
AVAVTNAVKP KVDQKEDATQ ELARSFKEAR SVLDELERVQ ESIIETTFDD VVKSEE
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