| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1239 |
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| Symbol | |
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| ID | 8414118 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1390386 |
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| End bp | 1391093 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 645022831 |
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| Product | transcriptional regulator, XRE family |
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| Protein accession | YP_003180255 |
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| Protein GI | 257785038 |
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| COG category | [K] Transcription |
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| COG ID | [COG1396] Predicted transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTACTT CATCTGAGAC CCTTGGTCGT CGTATTGCAC GTCTTCGTTT AGCTAAAACT
GCAACGCAGG AGCGTCTGGC AAAAGAGTTG AACGTGAGTC CGCAGGCGGT GAGCAAGTGG
GAGAGCGACA TTAACTATCC GGATATTTCG CTGCTGCCAG ATCTTGCACG CTTTCTTGGA
GTGTCCGTTG ACGAACTTTT GAGCGGCGCA AGTGCCTTCG CTCAGGAGAG TGTCGCTGCC
CAAGAGGGTA CTGCCGAGGT TGTTTCTGTT GCAGCCGACG AGCCCGCGGA GATCGTAGAA
GAGCCCACAG AGCAGGACAA CCAGGGCATT GCTACTCAGT CTTCAGGTTT CAGCTTTGGC
AAGCTTTTTG GTAAGAGCAT GGTCAAAGTC GAGAAAAACG ACGAGGCTGA CGGTAGCAAG
AAGAAGGACG TTCGCTTAGG CAATGGATCT GCAAAGCACG GGTTGCACGT GTATGTTGTT
TCCAACAACG GCGATGTTGT TGATATGTGC GTACCTTTGG GTCTGGCAAA GTTTGTGCTG
AATTCTGGAA TTCATATCAG TGGCAGCTAT CTTAATCAGG AGACTCAGAA GCAGCTCTCT
AACATTAATT TTGATGCGCT TATGGAAGCT GCAAAGACTG GCGAGAGTGG CACACTTGTG
GATATTACAT CCGCAGACGG TAACGTTGTA AAGATCTGGT TTGACTAA
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| Protein sequence | MTTSSETLGR RIARLRLAKT ATQERLAKEL NVSPQAVSKW ESDINYPDIS LLPDLARFLG
VSVDELLSGA SAFAQESVAA QEGTAEVVSV AADEPAEIVE EPTEQDNQGI ATQSSGFSFG
KLFGKSMVKV EKNDEADGSK KKDVRLGNGS AKHGLHVYVV SNNGDVVDMC VPLGLAKFVL
NSGIHISGSY LNQETQKQLS NINFDALMEA AKTGESGTLV DITSADGNVV KIWFD
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