| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1234 |
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| Symbol | |
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| ID | 8414113 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1385749 |
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| End bp | 1387068 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 645022827 |
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| Product | hypothetical protein |
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| Protein accession | YP_003180251 |
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| Protein GI | 257785034 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000907369 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGTACA CAAGAAGAGA TGTAGTAGCC GGTCTTCCAG TTTTGATGGC ATTCGGACTT
GCTGGTTGCA AAACCGCAAA AGCAACCGCT AATAACACAA CTGAAGACAC CAAGAAGGCT
TCAGAAGCAC TTCGGATTAC CGCCGCTCAG ACCCTGGATG GCTATGCAGT AAACAGCACT
ACTGCTGATG AGAATACCAT CCTGGTCAAT ACTACCGACG ATGTAACCAT TACCAATTCC
ACGGTTACTA AGACAGGAGA TTCCGACGGC GGAGATAACT GTAACTTCTA CGGTCAGAAC
GCTGCAGTAC TTGTTGAGGG AGGTTCAACC ACTACGCTGA CTAACCTCAC TGTTACTTCA
GATGCAAAGG GTGCCAACGG CATTTTTAGC TACGGAGGCA ACGGCGGTCA GAACGGCGGT
GACGGTGATG GCACCAAGGT TATTATCAAG GACACCACCA TCACTACAAC TGGCGACGGC
GCGGGTGGCA CCATGACAAC CGGTGGCGGC ACCACCAATG CCTACAACCT CACGGTTACC
ACAAACGGTC AGTCTTCTGC AGCTATTCGT ACCGATAGGG GCGGCGGAAC AGTTTACGTA
GACGGTGGTA CCTATACCTC CAATGGTCTA GGTTCGCCAG CCATCTACTC CACGGCAGAG
ATCCACGTTG CTAACGCCAC ACTTGTTTCT AACCTTTCCG AGGGCGTTTG TATTGAGGGC
TTGAACTCCA TTGAGCTTAC CGATTGCGAC CTTACGGCAA ACAACACCAA GTGCAATGGC
AACGCAACCT TCATGGACAC CATCATGATT TACCAGTCCA TGTCCGGAGA TGCAGCAACA
GGTAATTCCA CCTTTGCTAT GACTGGTGGT TCCCTCACCA GCAAGAACGG TCACATGTTC
CACGTTACTA ACACTAACGC TGACATTGAG CTCAATGGCG TCAAGTTAAC TAACGAAGAC
GCTGCTAACA TTCTTATCTC TGTCTGTGAT GACGGTTGGA ATGGCGGTAA TAATAAGGCA
ACCTTTAACG CTAAAGCGCA GGATCTGGTG GGAGCGGTGC TTGTTGGCAA CAACTCCACA
CTTGCTCTGA ACCTTACCGA AGGAACCACG TTTGAGGGTT ACGTTAACGG CAACATCGTC
AACGCCACTA ACCAGACTGT TTCCACTGAA GTTGGTACTG TTGCGGTAAC ACTGGATAAC
AACAGTACTT GGACTTTGAC AGCAGATAGC TATGTCACCG AGTTCAATGG TACTGCAGCA
AACGTTATTG CTAACGGTCA CACACTGTAT GTAAAAGGTA CGGCACTCAC GGGAACCTGA
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| Protein sequence | MQYTRRDVVA GLPVLMAFGL AGCKTAKATA NNTTEDTKKA SEALRITAAQ TLDGYAVNST
TADENTILVN TTDDVTITNS TVTKTGDSDG GDNCNFYGQN AAVLVEGGST TTLTNLTVTS
DAKGANGIFS YGGNGGQNGG DGDGTKVIIK DTTITTTGDG AGGTMTTGGG TTNAYNLTVT
TNGQSSAAIR TDRGGGTVYV DGGTYTSNGL GSPAIYSTAE IHVANATLVS NLSEGVCIEG
LNSIELTDCD LTANNTKCNG NATFMDTIMI YQSMSGDAAT GNSTFAMTGG SLTSKNGHMF
HVTNTNADIE LNGVKLTNED AANILISVCD DGWNGGNNKA TFNAKAQDLV GAVLVGNNST
LALNLTEGTT FEGYVNGNIV NATNQTVSTE VGTVAVTLDN NSTWTLTADS YVTEFNGTAA
NVIANGHTLY VKGTALTGT
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