| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1220 |
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| Symbol | |
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| ID | 8414099 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1368700 |
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| End bp | 1369830 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 645022814 |
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| Product | transcriptional regulator, LacI family |
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| Protein accession | YP_003180238 |
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| Protein GI | 257785021 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.485348 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCAGAAA AAGTCACTCT AAAAACGATT GCGCGCAAGG TGGGGCTATC ACCCGCTACG
GTTTCGCTGG TGCTGAATGG CCGACCGGTG CGTGTGAGCG ACGAGAACCG CCGTCGTATC
CTTGATGTTG CCCGTCGTGA GCATTACATT CCCAACCAGA TTGCAAGAAG CCTGGTCACG
CAGCATACGC AGACGTTGGG ACTGATTGTA CCGAATATCG AGAGCCGGTT TTTCTCGTCG
TTTGCAAAGA TGCTGGAGAT GAAATGCCGT CGTCGTGGGT ACGCGCTGTT TATCACCAAC
TCAGATAACA ACACGTCAAA CGATGCAGAT CTTGTGCGAC TGCTGGTTAA TCGCGGCGCC
GATGGCATCT TTATTATCAC GTCCGATGAG GTTGAAGCCT CGAAACAGCT CATTGCTGAC
CTAGAGCAGC TGCCTGTGCC GTACGTTATG GTAGACCGAA CTATTGACGC GCTCGACTGC
GATAAAGTTA CATTTAACAA TGAGCTTGGC GGCTATCTTG CCACAAAATA CTTGCTAGAC
CACGGTCATC GCCGAATTGC ATGCATGGTT AATACCGCAT CTAATACCGG GTGTGCGCGC
CTTAACGGCT ATGTTCGTGC ACTTGGCGAG AAGGGCCTGA AGTTTGATCA GTCACTTGTG
TTGACCAGTG ATTATTACAT TCCTGATGCA TATCTTGCGG CTCAGCAGTT GATTCGCATA
GATGCTACTG CTGTTATTGC GACGTCAGAC AACATTGCTT TGGGTTTGTT GCGCTATCTG
TACGAGCGCG GATTGCATGT TCCTCATGAT TATTCTGTTG TTGGATACGA TAACAGCATT
TCAGACGCAT TGTTTGAACC GGCGTTGACT TCGATTGAGC AAAATGTTGA TGAGCTTTCT
GACGCTGCAC TTTCGATTAT GTTCCGTCGT TTGAATGAGC ATGGAGCGGA TGTTGGTGTA
GATACAAGTG ATAGCGTTGG CGCAGATGCT GGTGCAGGTC TTAGTTTTGC AAGGGGTGAC
GCAGCAGGTC AGGAAAGTGC GGATGAACCG GCGGATAACG GGGATTCAAT TCAGATAATT
CTTGAGCCAC GTATGATTGA GAAGAATAGC GTACGTGTTT TGGACTGCTA G
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| Protein sequence | MAEKVTLKTI ARKVGLSPAT VSLVLNGRPV RVSDENRRRI LDVARREHYI PNQIARSLVT
QHTQTLGLIV PNIESRFFSS FAKMLEMKCR RRGYALFITN SDNNTSNDAD LVRLLVNRGA
DGIFIITSDE VEASKQLIAD LEQLPVPYVM VDRTIDALDC DKVTFNNELG GYLATKYLLD
HGHRRIACMV NTASNTGCAR LNGYVRALGE KGLKFDQSLV LTSDYYIPDA YLAAQQLIRI
DATAVIATSD NIALGLLRYL YERGLHVPHD YSVVGYDNSI SDALFEPALT SIEQNVDELS
DAALSIMFRR LNEHGADVGV DTSDSVGADA GAGLSFARGD AAGQESADEP ADNGDSIQII
LEPRMIEKNS VRVLDC
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