| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1197 |
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| Symbol | |
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| ID | 8414075 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1342729 |
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| End bp | 1343784 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 645022791 |
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| Product | protein of unknown function DUF871 |
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| Protein accession | YP_003180216 |
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| Protein GI | 257784999 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3589] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.717538 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCACCG GGATTTCACT GTATTTTGCC AGTGGATATG AAGCTAATGC TGAGGTTGTA
GCAAAAGCGC AGGCAGCCGG ATGTCACTAT GCATTTACCT CACTACACAT CCCTGAAGAA
GAGGAGATTG ATTACCGCAC TGAGGCTCGC AAGCTCTTAG AGCTTTGCAG AAAAGCTGAG
ATTAATCTTA TTGCTGATAT TTCTCCCGTT ACCCTTTCAA AACTTGGCGT TCAGAAGTTT
GACGAACTTG CAGAGCTTGG CATTACGTAC GTGCGCCTTG ACTTTGGATT TGACGCGGCA
GAGACTGTAG AGCTTTCTCA CAAGTTTCAT GTGGTTTTTA ATGCTTCAAC CATTACTAAG
GACGATATCT CTGCGTGGCG CGCAGCTGGT GCTGACTTCA CTCGTTTTGC CGCCTGCCAC
AATTACTATC CTAAGAGCTA CACAGGCCTT TCTCTTGAGC GCGTAGCTCA AATTAATGCG
CGTCTTTCTG CTCTTGGATT CCAGATTTTC TCGTTTGTTC CTGGCGAGGT TTTCCGTGGA
CCTCTCTATG AGGGATTGCC AACTGTTGAG GAACACCGTG GGCTCTCTGG TGATGCACTT
ATTCAGGCAA TGCTCTCACT TTACGACGTT GACTCTGACG TGGTGCTTAT TGGTGACCCA
GACGTCACTG AGGCTACCTG GAGGCGCATT GGTCAGCTTG AGAGAAACTG TATTGAGCTA
AAAGCTGAGT TGAAGTCTGA TTTTGAGTAT CTATATGACC GCACTCAGAC GGATAGACCT
GATTCCAGCT CGTATATTAT TCGCTCGCAG GAGTCCAGGC TCTGGAAAGA TGCTCCAGTA
TACGATGCAA AGTCTTCTAC TCGTGAGACT GTTTCTACTG GCACGATCTT GGTGAGTAGC
AAGGCTTATG GCCGCTATGC AGGGGAGCTT TCAATTGTTC GAGGTCTTTT GGAGCCTGAT
GCTCGTGATA ACGTTGCAGG ATTAATCTGC GAAGAAGATC AGGCGTTCTT GCCGTACATT
CACTCTGGCC GCGGTTTTAG GTTTGTACGC AAATAG
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| Protein sequence | MRTGISLYFA SGYEANAEVV AKAQAAGCHY AFTSLHIPEE EEIDYRTEAR KLLELCRKAE
INLIADISPV TLSKLGVQKF DELAELGITY VRLDFGFDAA ETVELSHKFH VVFNASTITK
DDISAWRAAG ADFTRFAACH NYYPKSYTGL SLERVAQINA RLSALGFQIF SFVPGEVFRG
PLYEGLPTVE EHRGLSGDAL IQAMLSLYDV DSDVVLIGDP DVTEATWRRI GQLERNCIEL
KAELKSDFEY LYDRTQTDRP DSSSYIIRSQ ESRLWKDAPV YDAKSSTRET VSTGTILVSS
KAYGRYAGEL SIVRGLLEPD ARDNVAGLIC EEDQAFLPYI HSGRGFRFVR K
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