| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1193 |
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| Symbol | |
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| ID | 8414071 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1336647 |
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| End bp | 1337567 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 645022787 |
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| Product | PfkB domain protein |
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| Protein accession | YP_003180212 |
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| Protein GI | 257784995 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0524] Sugar kinases, ribokinase family |
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| TIGRFAM ID | [TIGR02152] ribokinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.8184 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.176819 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCAAAG TGATTGTATT TGGAAGCCTG AACATGGACA TCTCTATTGA GGTGGATAAG
ATGCCTCAGC AGGGAGAAAC CATGGGCGGC AAAAATCTTG TCACAAGCCC AGGCGGAAAG
GGTGCCAACC AAGCAGTTGC TGCAGCTCGA ATGGGTGCAG ATGTTCACAT GATTGGTGCT
GTTGGTGCTG ATTCGTTTGG ACAGGACCTC AAGCAGTCGC TTATTGGCTA CGGTGTCAAT
GCGGAGCAGG TAGATGAGCT GTCTGGAGTC TCCACTGGTG TTGCCGTAAT CGTGCGTGTT
GGCGGCGACA ATCGCATCAT TTTGGACCAC GGCGCTAATC ATGCACGCAC AGTTGACGAC
GTAAAAGCAG TGCTCGATTG CATTGCAGAG CCAGGTGACG TGTTCTTGAC ACAGTTTGAG
TGCGAGTTGT CGAGCACGTT TGAGCTTATT AGGTACGCGC ATGAGCTGGG GCTCTATACG
ATGGTGAACC CATCGCCAGC GGCTACCATG ACCATCGGTC TTCTCGCCAG CGTGGACTTG
CTCTGCCTGA ACGAGATTGA GTTTGCGGAC CTGTTTGGTG AGGGCAAGAT CAGCCCACTG
GCAGAGCCAG AGGTCGCGGT GCAGAAGGTG CTTGCAAGTG GCGTGGCAAC TGCGGTGTTG
ACACTGGGGT CCAAGGGTTC GATTGCTGCT GATGCACAAG GCGTTTACCA GCAGGAATGC
TATCGCGTGG ATACCGTTGA CACTACCTGT GCAGGAGATA CGTTTATGGG TACACTCGCC
GCGTTTCAGG CGTCGGGACA GTTGCAGGGT CAAGATATCA AGCAGGCTCT TGACGTGGCT
GCGAAGGCTG CAGCGCTTGC TACTACTAAG GTTGGCGCTC AGCAATCAAT TCCAACGTAT
CAGCAGGTAG TTGACTTTTA G
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| Protein sequence | MGKVIVFGSL NMDISIEVDK MPQQGETMGG KNLVTSPGGK GANQAVAAAR MGADVHMIGA
VGADSFGQDL KQSLIGYGVN AEQVDELSGV STGVAVIVRV GGDNRIILDH GANHARTVDD
VKAVLDCIAE PGDVFLTQFE CELSSTFELI RYAHELGLYT MVNPSPAATM TIGLLASVDL
LCLNEIEFAD LFGEGKISPL AEPEVAVQKV LASGVATAVL TLGSKGSIAA DAQGVYQQEC
YRVDTVDTTC AGDTFMGTLA AFQASGQLQG QDIKQALDVA AKAAALATTK VGAQQSIPTY
QQVVDF
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