| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1187 |
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| Symbol | |
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| ID | 8414065 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1330477 |
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| End bp | 1332078 |
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| Gene Length | 1602 bp |
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| Protein Length | 533 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 645022781 |
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| Product | lysyl-tRNA synthetase |
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| Protein accession | YP_003180206 |
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| Protein GI | 257784989 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
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| TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.33244 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0846582 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGAAG TAGAAAACAA CATTGCTGGT AACTCGGCCG CTGCTGAGAA CACTGCTGCA
AAGAACAACA CAGCTGTCAT AACTGCCGCC GACGCAACTG AAGCCACCCC AGAAGCTTCC
ATTAACGACG AGCGTGCTCA GCGCAAGGCC CGTCGCCAGG CGCTGCTTGA CGCTGGCATT
GACCCATATC CAATCCAGTC CACTGTCACC GCTCACGTTG CTGAGCTGGA GGAGCGCTAC
GCTGACCTCG AGGACGGCCA GACTGGCGAG GAAGTTTATT CTGTCGCTGG CCGAGTCCGT
GCCATTCGCA ACCAGGGCAA GATCGCGTTT GTCGTGGTAG AGGACTATAC CGGTCAGATT
CAACTCTTCT GCCGCATCAA TAACCTTGAC GAGAAAAACT GGGAGCTTCT GGGTCTTCTC
GACCTTGGCG ACATCATCGG CGCAACCGGT GCTATTATGC GTACGCGCCG CGGCCAGCTT
TCTTTGGCAG TGACCTCGCT GGAGGTTCTC TCCAAGTCGC TGCGTCCTCT TCCAGAGAAA
TTCCACGGCC TCACTGATCG CGAGGTTCGT TATCGCCAGC GCTACGTTGA CCTCATCATG
AATCCTGAGG TCCGCGACGT ATTTCGCAAG CGCTCTCAGA TTATCTCCAT CATCCGCCAG
TTCATGGAGG CGGACGGCTA TATGGAGGTT GAGACTCCTG TTCTCCAGGA GATTCTTGGC
GGCGCAAACG CAAAGCCGTT CATCACACAT TACAATGCTC TAAACACCGA GGACTACCTG
CGCATTGCAA CCGAGCTCCC GCTGAAACGC CTGCTTGTTG GTGGTCTTGA GCGCGTCTAT
GAGCTTGGTC GTCAGTTCAG GAACGAGGGC ACCGACCTCA CGCACAATCC AGAGTTCACT
TCCATGGAGG CATATGCTGC CTACTCTGAC CTGGCCGGCA TGCGCGAGCT CTCCCAGAAC
CTCTTCCAAG AGATTGCTCG CAAGACCTGC GGTTGTGAGG AAGGCCACGA GGTCATCACC
TACCAGGGTA CCGAGGTTGA TCTCTCCGGC AACTGGCGCG TCGCATCTCT GGCAGAGATT
GCATCCGAGG TCACCGGCGA GGAGCTCTCC ATTGACACTC CTGTCGAGAA ACTCCGTGCA
GTCCTGGATC GCTACGAGAT TGAGTGGAAC CCAGAGTGGC AGGCTGGCAA GCTGCTCTTT
GAGATTTACG ACGAGCTTGG CGAGAAAAGC ATCGTAAACC CAACCTTTGT CTGTGATTAT
CCTGCAGAGG TTTCTCCGCT TACTAAACGC AAGGCAGACG ATCCTCGCCT GACCGATCGC
TTTGAGCTTA TTATCTGTGG CGCAGAGTAC GCAAACGCAT ATTCCGAGCT CAATGACCCT
GTTGATCAGG AGGAGCGCTT TGCTGCTCAG ATGGAGGCTA AACGTCAGGG CGACGAAGAG
GCCATGGAGT ACGATTACGA CTTCATTCGC GCACTTGAGT ATGGTATGCC ACCAGCGGGC
GGCATCGGCT ACGGCATCGA CCGCATGATG ATGCTCTTCT GCGATCAGCC TTCTATCCGC
GATGTCCTTC TCTTCCCACA GCTCAAGCCC GAGAAACGCT AA
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| Protein sequence | MSEVENNIAG NSAAAENTAA KNNTAVITAA DATEATPEAS INDERAQRKA RRQALLDAGI
DPYPIQSTVT AHVAELEERY ADLEDGQTGE EVYSVAGRVR AIRNQGKIAF VVVEDYTGQI
QLFCRINNLD EKNWELLGLL DLGDIIGATG AIMRTRRGQL SLAVTSLEVL SKSLRPLPEK
FHGLTDREVR YRQRYVDLIM NPEVRDVFRK RSQIISIIRQ FMEADGYMEV ETPVLQEILG
GANAKPFITH YNALNTEDYL RIATELPLKR LLVGGLERVY ELGRQFRNEG TDLTHNPEFT
SMEAYAAYSD LAGMRELSQN LFQEIARKTC GCEEGHEVIT YQGTEVDLSG NWRVASLAEI
ASEVTGEELS IDTPVEKLRA VLDRYEIEWN PEWQAGKLLF EIYDELGEKS IVNPTFVCDY
PAEVSPLTKR KADDPRLTDR FELIICGAEY ANAYSELNDP VDQEERFAAQ MEAKRQGDEE
AMEYDYDFIR ALEYGMPPAG GIGYGIDRMM MLFCDQPSIR DVLLFPQLKP EKR
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