| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1179 |
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| Symbol | |
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| ID | 8414057 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1320020 |
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| End bp | 1320598 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 645022773 |
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| Product | protein of unknown function DUF901 |
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| Protein accession | YP_003180198 |
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| Protein GI | 257784981 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3688] Predicted RNA-binding protein containing a PIN domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000010276 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000023752 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCTCAGA AAAAATCGCT GCTTGTGGTC GATGGCTATA ACGTTATGCT AGCAACTCCT
CGCTATGAGG CGTTGTTGAA TGAGCGCGGT TCTTTTGCTC AAGAAACCGC TGCTGAGAGA
GCCTATCACC TAAACAGCGA TCCGTTTTAT CGCGCTCGTT TGGCGCTCAT TTCTGATGTT
GCTACTTTTG CACAGGGCGC CTACGAGGCA GTTATTGTGT TTGATGGTAA GGGAAACGTA
AACGACGAGC GCCCGGAGCG CAGTCATGCA GGCGTACAGC TGGTCTTCTC CGAAACGGGG
GAGTCCGCAG ATAGTGTTAT CGAGCGCCTG GTTACAGAAG CGCGAGAGGC TGGTCGCAAA
GTATTTCTGG TCACGTCGGA TAGAGATATT CGTGCTACGG CCGGCTTTGG CCCCGGTGAG
GTCACACGCA TTGCCAGCGC CTCTCTTGTC CATGAGATTT CCCAGGCAGA TAACGTTGTC
GAAGAGATGC GCCGCGATCA GGTCAGTACG CGTATGACGC TAGAAGACCG CATTTCTCCA
GAACAGCGCG AGAAACTCTG GAAGCTGTTG GGCAGATAG
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| Protein sequence | MAQKKSLLVV DGYNVMLATP RYEALLNERG SFAQETAAER AYHLNSDPFY RARLALISDV
ATFAQGAYEA VIVFDGKGNV NDERPERSHA GVQLVFSETG ESADSVIERL VTEAREAGRK
VFLVTSDRDI RATAGFGPGE VTRIASASLV HEISQADNVV EEMRRDQVST RMTLEDRISP
EQREKLWKLL GR
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