Gene Apar_1176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApar_1176 
Symbol 
ID8414049 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAtopobium parvulum DSM 20469 
KingdomBacteria 
Replicon accessionNC_013203 
Strand
Start bp1316909 
End bp1317271 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content52% 
IMG OID645022765 
Productpreprotein translocase, SecE subunit 
Protein accessionYP_003180195 
Protein GI257784978 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0690] Preprotein translocase subunit SecE 
TIGRFAM ID[TIGR00964] preprotein translocase, SecE subunit, bacterial 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000187146 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000215336 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGGCAAATA AGGAGCGCAA TAAGAGGAGC GCACGTAAGG CTCGCGCAGA AGAGCGCGCT 
CAGCGTGAGG CCCTTCAGGC TGAGGCTACT TCTGAAGCTT CTGCTAAGGC TACCAAGGCC
GAGGCAAAGA AGCAGGAGAA GTCTATTCAG CGTAATGCTA ACCCTGGCTT CTTTGGTCGC
CTGGGTGCTT ATTTTGCAGG CGTTCGTACA GAAATGCACC GCGTCGTGTG GCCATCAAGC
TCTGAGCTTG CTGGCTTCTC TGTAGCCGTA ATTGCAACAA TTGTTTTCTT TGGCTTGGTA
ACTTGGCTGG TTGATACTGG CATTGTTGCT GGTCTCGTCG CCTTTACTGG ACTGAGGGGA
TAA
 
Protein sequence
MANKERNKRS ARKARAEERA QREALQAEAT SEASAKATKA EAKKQEKSIQ RNANPGFFGR 
LGAYFAGVRT EMHRVVWPSS SELAGFSVAV IATIVFFGLV TWLVDTGIVA GLVAFTGLRG