| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1094 |
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| Symbol | |
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| ID | 8413967 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1238898 |
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| End bp | 1239686 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 645022683 |
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| Product | Sec-independent protein translocase, TatC subunit |
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| Protein accession | YP_003180113 |
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| Protein GI | 257784896 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0805] Sec-independent protein secretion pathway component TatC |
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| TIGRFAM ID | [TIGR00945] Twin arginine targeting (Tat) protein translocase TatC |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCTATTA CTCCAGCTCG TATGCCACTT TTTGATCACT TGGGAGAACT TCGTCGTCGT
GTGACTATTG TGGTGGTGTC TCTTTTTGTT ACCGCAATCA TTATTTACTT TGCAACACCT
GCATTGATTG AGATTTTGAT TGATCCTATT AAGGAGTTTC TAACCGACGG TAAACTTACG
GTTATCTCGG TTCTTGGTGG CTTTAGCATC AGGTTTAAGG TGGCTTTTTT CTTCTCGGTG
ATTATCTGTA CACCTATTAT CATCTGGGAA ATTATGGCAT TCTTTTTGCC CGCGCTTAAC
GCTAAAGAGC GCAAGTGGGT TGTTCCTACT GTAGCCGCTA TGATTACCCT GTTCTTCTTG
GGTATGTTGT TCTGTTACTT TGTCATTTTG AACACTGCTA TTGGTTGGAT GATTGGACAG
TCGCAGGAGT TTGCAGGAAC TATTAATGAG GCAAGCGATT ATCTCGATAT TATTATGATG
TTTGAGATTG GTTTTGGCGT AGCATTCCAA CTTCCATTGG TTATCTTCTA CCTGGCCATC
CTTCATCTTG TTCCTTATAA AAACATGCGT GAACAATGGC GTTATGTCTA TGTTGGTCTG
ATGATCCTTT CCGCAGTGGT CACTCCCGAT GCATCGCCTG TCACCATGAT TTTGATGTTT
ACAGCTCTTA TTTTGCTGTA CGAAATTGCT TTGGCTGTTG CTCGTTATGT CATTATTGCT
CGCGATGGTA AGGCTGCTCT TAAGTGGAGC CGCGAGGACT ACGATCAGCA CGAGCTCGAT
AAAATCTAG
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| Protein sequence | MPITPARMPL FDHLGELRRR VTIVVVSLFV TAIIIYFATP ALIEILIDPI KEFLTDGKLT
VISVLGGFSI RFKVAFFFSV IICTPIIIWE IMAFFLPALN AKERKWVVPT VAAMITLFFL
GMLFCYFVIL NTAIGWMIGQ SQEFAGTINE ASDYLDIIMM FEIGFGVAFQ LPLVIFYLAI
LHLVPYKNMR EQWRYVYVGL MILSAVVTPD ASPVTMILMF TALILLYEIA LAVARYVIIA
RDGKAALKWS REDYDQHELD KI
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